Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0425 ATGCAACCAAGAGAGGGGAAGCCGCCATTACTAAAAGGAGACCCGGTTATTAAACTTCAAAATGGGGTTGCTTCTATCAGTAGGAATATAAAGTTTACTGATAACTCTTGCTGGAGAAGAACCAAAATGTTTCGGTTAGGAGTAAAAATTGTGGGATCTAATTCCGTTAGAGCAGACATTAAGGAAGGCAGAAGTAACCCCTTTAAGGTCTTGGATAAGCGAGGAGAGGCGTACAAGAAACACGACCGTCCATCAGTGAATAATGACGTATGGCGTCTGAGAGGTATAGGAAAAGGGGGTCCGATTCACAAGGAGCTTTCCAAGAATGATGTAAAAACTGTCAAGGATCTTTTGCGGTTGAACACAACCGGTTCATTACGGGAGAAATTCGGCAACAATAATACATGGGACAAAATCATTGCACATGCTAAATATTGTGAATTAGACGATGAAGAGCGCTACTTCTATAGCACAAATGATCAATCAGAGCCCCTTATCCTCATCCTCAACTGCATCTATGAGGTTGTGGAGGTGAATTTTTCTGGGCAAAACTGTAGTCGTTCCCTGCAATCTCTAAATCCGAACGAGAAGCGTTTGGTGGAAAGAGTAAAGCAGGAAGCATACAATAATTTGAAGGATCTGAAGCCAACAGCTGAGACAACAACACTAGCGGCACCATACGGCGCTCCAGATCAAGGGAGGCAGGTTGTCCCAGAAGAAGCATATGTTAATGGTGCAAACGGAATCAACGGATTGGCCTTACCACAGACGGATTCATTTGATTTTGCAAGTTTATTTGCTCCAGACTACTTTAACCAATTGGAGCAACTAAATTGCTCTCTTCTTTTTGGTGAAGGAGCATCATGTAGCAATGGGAGAAGCAAGAAACATTGGCAGAAGATTCGAAATGCTCACAAATACTGCGTGTGGCTAAAAGGAGGGCAAAACATTTTCGCCGTCAGTATTGAAGACTATTACTAA 981 0.4261 MQPREGKPPLLKGDPVIKLQNGVASISRNIKFTDNSCWRRTKMFRLGVKIVGSNSVRADIKEGRSNPFKVLDKRGEAYKKHDRPSVNNDVWRLRGIGKGGPIHKELSKNDVKTVKDLLRLNTTGSLREKFGNNNTWDKIIAHAKYCELDDEERYFYSTNDQSEPLILILNCIYEVVEVNFSGQNCSRSLQSLNPNEKRLVERVKQEAYNNLKDLKPTAETTTLAAPYGAPDQGRQVVPEEAYVNGANGINGLALPQTDSFDFASLFAPDYFNQLEQLNCSLLFGEGASCSNGRSKKHWQKIRNAHKYCVWLKGGQNIFAVSIEDYY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0425 326 Pfam Calmodulin binding protein C-terminal domain 153 215 IPR046829 -
Ssu4g0425 326 Pfam Calmodulin binding protein-like N-terminal domain 2 72 IPR046831 -
Ssu4g0425 326 Pfam Calmodulin binding protein central domain 87 146 IPR046830 -
Ssu4g0425 326 PANTHER CALMODULIN-BINDING PROTEIN 60 G 2 261 - -
Ssu4g0425 326 PANTHER OS02G0177800 PROTEIN 2 261 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0425 Ssu-Chr4 6922325 6924220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0425 1 248 Calmodulin-binding Proteins AT5G26920 35.968 4.63e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0425 - - gmx:100797598 261.151