Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0366 ATGAGCGCCGAAGCAGACAACACTTCAGATGCGGTGAACCTAACTATACTTGCAGGACTTGAGCTGGTTTCGATATTGCCTCTACCATCTGATTATTTGGATTTTGATATATCATCAGAGAATGCACTAGCGCAATTGAACAATGAGACCTCTGAAAACATGGATGAGAATAGTATGTCCAGTGGAATCCATGAGTGTTCTCCTGATAAGGGTCATACACTCCCAATATTGAAGAAAGTCCTTGACTTGAGTACTAAAGTTCaggtaaattttaaatCCCTATCTGATCAAGTGAAACTCACAACTGAGTCATTTCCAGGCCTAGATGTTTTAAAGTCTGTTCAGCTTCTTGGTGCTGAATATGAAGTCTTGAAAAGAAAGTACCTAGAGGAGTCCTCTGAGCGTAGGCAGCTTTACAATGAAGTGATTGAACTAAAGGGAAATATCAGAGTTTTCTGCAGATGCAGACCATTAAATGAAAGTGAAATTGCAAATGGATCAGGAGTATCTGTTGTCAATTTTGAGTCATCTCCTGATGAGCTCCAAGTCATTTGCTCTGATTCTTCTAAAAAGcggtttaaatttgattatgtatTCAGACCTGAAGATAACCAAGAGACTGTTTTTGAACAAACAAAACCTATCATCACATCTGTATTAGATGGGTATAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGCAAGACTTTTACAATGGAGGGAACACCAGAGCATAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCGTATATCTGAAGAGAGACAAGGcacaataaaatatgaattgctTGTTAGCATATTGGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTTGGTTGAACCTACTAAGAAGTTGGAGATAAAACAAGCTGCAGATGGAACCCAAGAAGTCCCAGGACTTGTTGAAGCCCGTGTTTACGGAGCAGAGGATGTGTGGGAAAAGCTGAAGTCTGGAAACCGAGTCAGATCTGTTGGATCCACTAATGCTAATGAGCTTAGCAGTCGTTCTCATTgTTTGTTGCGAGTGACTGTTTTGGGGGAGAATTTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGACTTAGCGGGCAGTGAGCGTGTGGGGAAAACTGAAGCTGAAGGAGAAAGACTAAAGGAATCTCAATTCATAAACAAGTCTCTATCAGCACTTGGTGATGTTATTTCAGCCCTTGCATCCAAATCGGCCCACATACCTTACAGGAACTCAAAGCTCACCCATGTACTCCAGACCTCTTTAGGGGGTGATTGCAAAACTTTAATGTTTGTCCAGATAAGTCCAAGTGCAACAGACTTAACAGAGACACTTTGTTCTCTGAATTTTGCCACGCGTGTACGAGGAATTGAGAGTGGCCCAGCCCGCAAGCAAACAGACTTTACTGAACTGTACAAGCACAAGCAAATGGCAGAAAAGCTCAAACACGATGAAAAGGAAACtagaaaattacaagataaCTTGCAGACACTGCAAATGAGACTTGATACTAGAGAACTCTTGTGCCGAAATCTTCAAGAAAAGGTTCGGGATCTTGAGAACCAGAGAGCAGAGGAGAGAAAAATCAGACTGAAACAAGAAAGTAGATCGCTTGCTGCTGTTTCAGCTCAACCTTCAACAGTGTCAGAGTCAACAAGAAATCACACGGCTACTGAGAAAGCCATAAAGAAGCCACCACTGAATCTTTCAAAAAGACCAGCACTGAGAAGAATTACTAACTTCTTGCCTCCACCAGCCGAGAGAAGGCCCTCATGTATCTCTTCCCTAGATGGAAAGGGAAACATTGTCAGAACGAATTCAATGACTACAAATACACTTATGAAAGCAAGAAGGGTATCCATTGCTGCAAAACCCCCACCGGCACCCATGGCACAATCAACAACACAGGCCGTTAAGCCTAGAAGGCGAGTTTCCCTGGCTACCCTCCGTCCTGTCACAACTGATATGACATCTCCACTCCGTTCCCCCACTCAGCAATCCCTGATCAGGAAACAAAGGAAAGATCGGTATTCAAGGATTTTTGCCTCATTGTCAGGAATGAGAACCTCAGTTGAGACAACACCAACTTTGATGAGGAGCAGCAGTAAATTTGTGGGCAGTCCAACAGGGGTTGCACTGCAACGTAAACCTTTAGTGTGGACTCCTCTCAAGCAGAAAGGCCTGAAGATTAGCAGCAGAAGGTCATTGGTCATGCCACCTCGGCCCTTCTACTGA 2280 0.4193 MSAEADNTSDAVNLTILAGLELVSILPLPSDYLDFDISSENALAQLNNETSENMDENSMSSGIHECSPDKGHTLPILKKVLDLSTKVQVNFKSLSDQVKLTTESFPGLDVLKSVQLLGAEYEVLKRKYLEESSERRQLYNEVIELKGNIRVFCRCRPLNESEIANGSGVSVVNFESSPDELQVICSDSSKKRFKFDYVFRPEDNQETVFEQTKPIITSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRISEERQGTIKYELLVSILEVYNEKIRDLLVENLVEPTKKLEIKQAADGTQEVPGLVEARVYGAEDVWEKLKSGNRVRSVGSTNANELSSRSHCLLRVTVLGENLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHVLQTSLGGDCKTLMFVQISPSATDLTETLCSLNFATRVRGIESGPARKQTDFTELYKHKQMAEKLKHDEKETRKLQDNLQTLQMRLDTRELLCRNLQEKVRDLENQRAEERKIRLKQESRSLAAVSAQPSTVSESTRNHTATEKAIKKPPLNLSKRPALRRITNFLPPPAERRPSCISSLDGKGNIVRTNSMTTNTLMKARRVSIAAKPPPAPMAQSTTQAVKPRRRVSLATLRPVTTDMTSPLRSPTQQSLIRKQRKDRYSRIFASLSGMRTSVETTPTLMRSSSKFVGSPTGVALQRKPLVWTPLKQKGLKISSRRSLVMPPRPFY 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0366 759 ProSiteProfiles Kinesin motor domain profile. 148 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g0366 759 CDD KISc_C_terminal 146 473 - -
Ssu4g0366 759 PANTHER KINESIN-RELATED 84 751 IPR027640 GO:0003777|GO:0007018
Ssu4g0366 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 508 IPR027417 -
Ssu4g0366 759 ProSitePatterns Kinesin motor domain signature. 372 383 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu4g0366 759 Gene3D Kinesin motor domain 143 515 IPR036961 -
Ssu4g0366 759 PANTHER KINESIN-LIKE PROTEIN KIN-14S 84 751 - -
Ssu4g0366 759 Coils Coil 489 556 - -
Ssu4g0366 759 Pfam Kinesin motor domain 154 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g0366 759 PRINTS Kinesin heavy chain signature 222 243 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g0366 759 PRINTS Kinesin heavy chain signature 342 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g0366 759 PRINTS Kinesin heavy chain signature 373 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g0366 759 PRINTS Kinesin heavy chain signature 422 443 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu4g0366 759 SMART kinesin_4 146 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0366 Ssu-Chr4 5872195 5876553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0366 114 478 Calmodulin-binding Proteins AT5G65930 42.779 3.58e-77 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0366 K10406 - gmx:100808603 1025.39