Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0345 ATGGCCGCCGTCACCCTCCTCTCCCTCGGCAACGGCGCACCCGACGTCTTCTCCTCGCTCGCCGCCCTCCGCGCCGGCCAGTACCGCACCGGCTTCGGCGCCATCCTCTCCGCCGGCACCTTCGTCTCCGCCCTCGTCGTCGGCTTCGTCGCCATCTACGCCGCGCCCTTCGCCGTCGATCCCGCCCCCTTCGTTAGGGACGTCCTCTTCTACCTCACCGCCGCCTTCTTCCTCTTCTACGTCTACCTCACCGCCGAGATTTTCCTCTGGCAGGCCGTCGGATTCGTTGGATTCTACTTCTTCTTCGTCGGGTTGGTGTTCTACATGGATTTCGGGATGGCGGATCGCACGGAAAAGAGTTCTTCCGCGGATCTCGAGGGGCAGAACGAACTGGGTTCCGACGTCAAGGTTTCGGGATCTCGCGAGGGACAGAAACGCGCTTCTGGATTGCGTGGGGCTATTCGATTGGTTTCTAAAGCATGGGAGCTTCCTGTCTCAACTCTCCTAAGGTTGACAATCCCTCAACCAGCACCATCACAGTGGAGCAGATTTTATGCATCAGCCAATATTGCACTTTGTCCGCTAGCCCTCTTGTATGCCTGCAACTCATTCATGTCATTTAATCATCCCATAGTTTTCCTCCTCCCCAACACTCACTTCCCCCTCTGGTCAGTAGTGCTCATGACAAGTTTCTCTCTTGCATTTCTTCATTTTGTAATGGAAAAAGAACCCCCCAAAACAGAGCACGTGCCTGTGGTCGTCATGGCATTTGTCATGAGCGTGTTTTGGATATCTACTACAGCTGGAGAGCTAGTGAACTGCCTGGAAGCTATAGGCACTGCTTCTCAAATTGCCGCCAGCACTCCTGGGTCTTACGGTGCTGGCATGGGGAAATTCAGTGGGAGATCTTGTTGCTGA 918 0.5545 MAAVTLLSLGNGAPDVFSSLAALRAGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFAVDPAPFVRDVLFYLTAAFFLFYVYLTAEIFLWQAVGFVGFYFFFVGLVFYMDFGMADRTEKSSSADLEGQNELGSDVKVSGSREGQKRASGLRGAIRLVSKAWELPVSTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMSFNHPIVFLLPNTHFPLWSVVLMTSFSLAFLHFVMEKEPPKTEHVPVVVMAFVMSVFWISTTAGELVNCLEAIGTASQIAASTPGSYGAGMGKFSGRSCC 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0345 305 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 1 123 - -
Ssu4g0345 305 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 157 287 - -
Ssu4g0345 305 Gene3D - 1 123 IPR044880 -
Ssu4g0345 305 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 157 287 - -
Ssu4g0345 305 MobiDBLite consensus disorder prediction 124 144 - -
Ssu4g0345 305 Pfam Sodium/calcium exchanger protein 2 106 IPR004837 GO:0016021|GO:0055085
Ssu4g0345 305 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0345 Ssu-Chr4 5705386 5707361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0345 1 280 Antiporters AT1G08960 67.247 1.08e-131 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0345 K13754 - gmx:100775437 455.677