Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0290 ATGGCAACTTTGCCGGTGGATCTCTCTGGGATAAGTCTGCGGCCATTCAAGATGAGTGACGTTGGCGATTTCTTGTTGTGGGCAGGGGATGATCAAGTGACTCGAAACCTCCGATGGAAGACGTGTGGTTCCAGGGAAGAGGCTTTGGCCTTCATAAGGGATGTTTGCATACCTCACCCTTGGCGCCGGTCAATCTGCCTTGATGACCGTTCCGTAGGCTTTGTTTCGGTATATCGTTGGTCAGGTGATGAAAGGTGCAAGGCAGACATAGGCTATGCTATTGCGACTAACTACTGGGGCCAAGGGATAGCCACCAAAGCACTCAAGATTGCAGTGCCTCAAGTCTTCATGGATTTCCCTGATTTGCTGAGGTTGCAGGCTTTTGTTGATGTTGAGAACAAAGCTTCTCAGAGGGTGTTGGAAAAGGCTGGCTTCCTTAGAGAGGGTGTACTCAGAAAGTACACTTATCTCAAGGGGATTGTTAAGGATTTGGTTTTGTATAGTTTTTTGTCAACGGATGAAATTCCTCCTGGTGACTAG 540 0.4815 MATLPVDLSGISLRPFKMSDVGDFLLWAGDDQVTRNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSVGFVSVYRWSGDERCKADIGYAIATNYWGQGIATKALKIAVPQVFMDFPDLLRLQAFVDVENKASQRVLEKAGFLREGVLRKYTYLKGIVKDLVLYSFLSTDEIPPGD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0290 179 Pfam Acetyltransferase (GNAT) domain 13 145 IPR000182 GO:0016407
Ssu4g0290 179 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 170 IPR016181 -
Ssu4g0290 179 Gene3D - 8 175 - -
Ssu4g0290 179 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 167 IPR000182 GO:0016407
Ssu4g0290 179 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 7 176 - -
Ssu4g0290 179 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0290 Ssu-Chr4 4899540 4900079 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu4g0290 Acetyltransf_3 7e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0290 - - gmx:100527210 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0290 4 4899540 4900079 Ssu4g0290 4 4899540 4900079 ECH