Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0289 ATGACGCTCCATATGCGTCGACGATCTGACCATTGGGTTTGTGTCCGTGTCTCCTGGATCAGGTGTAGGGCGGAGATTGGCTATGCCATAGCTGCCAAGTACTGGGGCCAAGGGATTGGCACCAAAGCGGTGAAGATTGCTGTGTCACAAGTCTTCAAGGATGTCCCTGATTTGGTAAGGGTACAAGCTTTTGTTGATGTAGAGAACAAAGCGTCCCAAAGGGTGTTGGAAAAAGCAGGATTCGTTAAGGAGGGCATACTCAAAAAGTATGTGTATGTCAAAGGGATCATTAAGGACGTGGCTATTTTTAGTCTTGTGTTAGATGGTACCCATCCTCCACTGTAA 345 0.4725 MTLHMRRRSDHWVCVRVSWIRCRAEIGYAIAAKYWGQGIGTKAVKIAVSQVFKDVPDLVRVQAFVDVENKASQRVLEKAGFVKEGILKKYVYVKGIIKDVAIFSLVLDGTHPPL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0289 114 Pfam Acetyltransferase (GNAT) domain 15 82 IPR000182 GO:0016407
Ssu4g0289 114 Gene3D - 11 109 - -
Ssu4g0289 114 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 21 112 - -
Ssu4g0289 114 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 99 IPR000182 GO:0016407
Ssu4g0289 114 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 21 112 - -
Ssu4g0289 114 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 105 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0289 Ssu-Chr4 4896124 4896468 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu4g0289 Acetyltransf_3 1.2e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0289 - - mtr:MTR_3g463610 149.828