Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0225 ATGGATTGGGCTTTTGTGCATAAAATATGGGATAAGTGGGCTTCTGCAAACATTGGTTATTCTGGTCATCCGTTGAAAGCTGCTTTGCTAATTAATTATGACCCGACTGGACCATCTCGATTGTTATCTACCATTGCTGAACAAGAAGGAATAAAAGCTAATCCCATTGAATTGAGTCACTTCGTGGActtcatcaaacaaaataaactcCAGACAGAGACCTTCATTATTGGGTCCAATCAGTACTTGGTCACTACAATTCATGAGAACTGGTTTGGCGCAAGGTGTATAAACACATCAAAGCCTGCTGGTGAAGGTGCTATTGTTATTCAAACGGCAGCATATATCTTGGTTGCTCTGTACGAAGGTTCTATTGGTCCAGCATCTCGTGCTATGGCAGCTGCTGATCAGTTAACTTGGCAATTAGGGcgaaaaaatctttaa 444 0.3896 MDWAFVHKIWDKWASANIGYSGHPLKAALLINYDPTGPSRLLSTIAEQEGIKANPIELSHFVDFIKQNKLQTETFIIGSNQYLVTTIHENWFGARCINTSKPAGEGAIVIQTAAYILVALYEGSIGPASRAMAAADQLTWQLGRKNL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0225 147 SUPERFAMILY Profilin (actin-binding protein) 10 142 IPR036140 -
Ssu4g0225 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Ssu4g0225 147 Pfam Profilin 10 142 IPR005455 GO:0003779
Ssu4g0225 147 Gene3D Dynein light chain 2a, cytoplasmic 10 146 - -
Ssu4g0225 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0225 1 147 Carbohydrate Esterase AT4G19410 68.919 8.00e-72 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0225 - - gmx:100811973 289.656