Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0180 ATGTTTTGGTGCAAGACATCACTTGTGAGCAGCAACTCTCAGGCCTCATTCACGTGCACGTCCAAGACAATGAAGAGCAAGAACTTATCACACATTATTATCCTGTCAATCTTGTCTTTGTTATGCCTATGTAATTCAAAGCGAGTGGTAGAGAGAGCTACTTATATAGTTCACATGGACAAGTCTCATATGCCCAAAGTTTTCACCTCCCAACACCACTGGTATTCATCCACCGTTACTTCCCTCGACTCCGCCACTCAACGGGAAAACCCCTCCATTTTGTACTCTTACGACAACGCACTTCACGGCTTCAGCGTTTCCCTCCTTTCACCACACCAACTGGAGACTCTAAAGCAAACCCCTGGTTTCATCTCGGCATACAGAGACAGAACAACCACGCTTGACACCACCCAAACCTACGGCTTCCTCTCTCTCAACCACTCCCATGGCCTCTGGCCCGCTTCCAACTACGGCCAAAACGTCGTCGTTGCCGTCATCGATTCCGGAATCTGGCCCGAGAGCGACAGCTTCAGAGACGATGGCATGCTGACCCAAACTCCTTCGACGTGGAAGGGCACGTGCGAGGGTGGTCAACGCTTTGACCCCTCCCTCTGCAACTCCAAACTCGTAGGCGCGAGGTATTTCAACAAAGGCGTCCTCGCAGCGCACGACGGTGACGCTAAAGCCGGCGCCAACTCCGTTAGAGACACCGAGGGACACGGGACCCACACGTCGTCCACGGTCGCTGGCAACTACGTAAACGGCGCGTCGTTTTTCGGTTACGCTAAGGGCACGGCAAGAGGAATTGCGCCACGCGCTAAAATTGCTGTGTACAAAGTTGCGTGGCCGCGAGGCGTGTACTCCTCGGACGTTCTCGCGGGTTTGGACCAAGCAATCGCTGACGGAGTGGACGTGATTTCCATCTCAATGGGTTTCGACACGGTGCCGTTGTACGAGGACCCCGTAGCCGTTGCCGCTTTCTCTGCCTTGGAGAAAGGCGTGGTGGTTTCAGCTTCAGCGGGAAACGGAGGTCCGTCACTCGGGTCCTTGCATAACGGGATTCCGTGGGTTTTGACGGTTGGAGCCAGCAACACAGAGCGTTCGTTTGGGGGGACGTTAATTCTCGGTAACGGAAAGAGGTTTTCGGGGTGGACTCTGTTCCCGGCAAGTGCCGCGGTTAATGACCTTCCTCTGGTTTACCGTAACAACGCCTCGGCGTGTGACTCTTCTAAACTATTGTCACGTGTAGCACGTGGCAGCATCGTCATATGCGATTCTGTTACGGACGACGTTAACCAACAGATTGAGCGCGTGTCGTCGTCTGAAGTGTATGGAGCTATATTTATAACCAGTGATCCCAAAGTCTTTGAAATGGGAACGATGACGTGTCCCGGGGTTGTGATTAGCCCTGAGGATGGGGAAGACGTGATCAAATATGCACGAGGGACACGACGCCCTTCGGCTACTATAAAGTTTCAAGAAACCCATGTTGGAATTGGAACGAAGCGGGCTCCCACGGTGGCTACGTACAGTTCGAGAGGCCCGTCTTGGGGGTGTCCATGGACATTGAAGCCAGACGTGATGGCTCCTGGGTCGTCAATTTTGGCGGCTTGGGTTCCGGATTTGCCCGCGGCCCAAATTGGCCCAAACGTGCTGTTAAATAACGAATACAATTTGTTGTCGGGTACGTCCATGGCGTGCCCTCATGCTTCCGGGGTGGTGGCTCTGTTGAAGAACGCACACCCTGAATGGAGTGCTTCTGCTATTAGGTCTGCTTTGACAACTACGGCTAACCCACTGGATAACACTGGAAAGCCCATCGAAGAAAACGGAGAGTTTCCTCAACGGGCTTCTCCTCTAGCCATGGGAGCTGGCCTGATTGACCCTAACCGGGCCCTTGACCCAGGTTTGGTTTATGATGCCACCCCTCAAGACTATGTTGACCTCCTTTGTGCGATGAATTTCACCCAGGCCCAAATCTTGGCGATAACTCGATCAAAGGCCTATAATTGCTCAAAGCCATCTTATGACCTCAACTACCCCTCTTTCGTGGCTTTCTATGCTAACGAGAGAGTGACAGCGGAGAGAAAATTTCGGAGAACTGTGACTTACGTTGGAGATGGTCCAGCTGCTTACACGGCACGAGTGAGCTCGTTCAATGGCACCGCAATAACCGTATCTCCCAATAGGCTGgtctttaagaaaaaatatgagaagCGGAAATTCGTTTTCACATTGAAGTCTCAAATGGACAAGGAATATGCTGTGGCTTTTGGTGCGCTCGAATGGGTTGAAGAAACAGGAAGGCATGTTGTTAGGAGTCCCGTTGTGGTGGTACGTAGGAACACTGTCTCCAACCCCCAAAGTGGCATTTAA 2376 0.5189 MFWCKTSLVSSNSQASFTCTSKTMKSKNLSHIIILSILSLLCLCNSKRVVERATYIVHMDKSHMPKVFTSQHHWYSSTVTSLDSATQRENPSILYSYDNALHGFSVSLLSPHQLETLKQTPGFISAYRDRTTTLDTTQTYGFLSLNHSHGLWPASNYGQNVVVAVIDSGIWPESDSFRDDGMLTQTPSTWKGTCEGGQRFDPSLCNSKLVGARYFNKGVLAAHDGDAKAGANSVRDTEGHGTHTSSTVAGNYVNGASFFGYAKGTARGIAPRAKIAVYKVAWPRGVYSSDVLAGLDQAIADGVDVISISMGFDTVPLYEDPVAVAAFSALEKGVVVSASAGNGGPSLGSLHNGIPWVLTVGASNTERSFGGTLILGNGKRFSGWTLFPASAAVNDLPLVYRNNASACDSSKLLSRVARGSIVICDSVTDDVNQQIERVSSSEVYGAIFITSDPKVFEMGTMTCPGVVISPEDGEDVIKYARGTRRPSATIKFQETHVGIGTKRAPTVATYSSRGPSWGCPWTLKPDVMAPGSSILAAWVPDLPAAQIGPNVLLNNEYNLLSGTSMACPHASGVVALLKNAHPEWSASAIRSALTTTANPLDNTGKPIEENGEFPQRASPLAMGAGLIDPNRALDPGLVYDATPQDYVDLLCAMNFTQAQILAITRSKAYNCSKPSYDLNYPSFVAFYANERVTAERKFRRTVTYVGDGPAAYTARVSSFNGTAITVSPNRLVFKKKYEKRKFVFTLKSQMDKEYAVAFGALEWVEETGRHVVRSPVVVVRRNTVSNPQSGI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0180 791 Gene3D - 366 497 - -
Ssu4g0180 791 Pfam Subtilase family 158 600 IPR000209 GO:0006508|GO:0008236
Ssu4g0180 791 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 779 IPR045051 -
Ssu4g0180 791 Pfam Fibronectin type-III domain 677 778 IPR041469 -
Ssu4g0180 791 CDD PA_subtilisin_like 372 490 - -
Ssu4g0180 791 CDD Peptidases_S8_3 142 598 IPR034197 -
Ssu4g0180 791 Pfam Peptidase inhibitor I9 54 134 IPR010259 -
Ssu4g0180 791 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
Ssu4g0180 791 PRINTS Subtilisin serine protease family (S8) signature 158 177 IPR015500 -
Ssu4g0180 791 PRINTS Subtilisin serine protease family (S8) signature 236 249 IPR015500 -
Ssu4g0180 791 ProSiteProfiles Serine proteases, subtilase domain profile. 139 633 - -
Ssu4g0180 791 Gene3D Peptidase S8/S53 domain 160 646 IPR036852 GO:0004252|GO:0006508
Ssu4g0180 791 Gene3D - 650 780 - -
Ssu4g0180 791 SUPERFAMILY Subtilisin-like 138 637 IPR036852 GO:0004252|GO:0006508
Ssu4g0180 791 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
Ssu4g0180 791 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 45 779 - -
Ssu4g0180 791 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 43 135 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0180 Ssu-Chr4 2920952 2923327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0180 40 778 Subtilisin-like Serine Gene Family AT5G67360 42.464 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0180 - - ccaj:109796640 1245.72