Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0167 ATGGGAAACAATGAGGAAGAGAAATCTACCAAGACTGAAAAGCCTTCTTCACTGGTAACAATGGATCAGGCCAATCAGACCAACCAGACCAACCAGACCAATATTCATGTCTATCCTGATTGGGCAGCGATGCAGGCATTTTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCGGCTGTGGCTTCTGGTCACGCTCCTCACCCGTACATGTGGGGACCACCACAGCCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATTCACATGGAGGAGTTTATACTCACCCTGCAGTTCCTATTggGCCACATCCACATGGTCAAGGAGTTCCATCTTCACCTGCTGCTGGGACTCCTTTAAGCATAGAGACACCACCCAAATCATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCAATAGGCAATGGCCATGCTGAAAGTGCAGAGCGTGGAGGTGAAAACAGGCTGTCACAGAGGTTTGTTGatctgttttctttttgtatgaatatttttaaagacaTGCTTTCTGAGTTTCTAGATATCTCCCCTTCTTATGCTGGGGGTGGTGGAGAGGGGAAAATCTGTCATTTGATACTCTTTAGTGAGTTCAACCTACTTTCTCTCCCTCTGTCTAGAATAGTGGTCCATGAGTTGGTTATTGTAACGGGATCTTGTGGATGA 720 0.4403 MGNNEEEKSTKTEKPSSLVTMDQANQTNQTNQTNIHVYPDWAAMQAFYGPRVTMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYTHPAVPIGPHPHGQGVPSSPAAGTPLSIETPPKSSGNTDQGLMKKLKEFDGLAMSIGNGHAESAERGGENRLSQRFVDLFSFCMNIFKDMLSEFLDISPSYAGGGGEGKICHLILFSEFNLLSLPLSRIVVHELVIVTGSCG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0167 239 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 171 IPR044827 GO:0003700|GO:0006355|GO:0043565
Ssu4g0167 239 MobiDBLite consensus disorder prediction 117 136 - -
Ssu4g0167 239 PANTHER G-BOX-BINDING FACTOR 3 1 171 - -
Ssu4g0167 239 Pfam G-box binding protein MFMR 1 103 IPR012900 -
Ssu4g0167 239 MobiDBLite consensus disorder prediction 104 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0167 Ssu-Chr4 2778351 2780344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0167 1 160 bZIP Transcription Factor Family AT2G46270 63.415 7.54e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0167 K09060 K01792 gmx:778133 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0167 4 2778351 2780344 Ssu4g0167 4 2778351 2780344 ECH
Ssu4g0167 4 2778351 2780344 Ssu4g2893 4 73963500 73966769 PCT