Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0134 ATGAATGCAAAGGGACATAAATTTGTGAGGTTTGAGGACTGGAAATCAGAGTCATCTTTTAGCATAGAGCAAGAAGATTCTATTAACCATGGAAATCACAAAAGAAAAGCTAGACCAAGTGTGAGTGCTGTTTTGAAGAGTATAGGAAGAAGGCTGGAGAGTGGGTCAGAGAAGATGAAGAACTTGAGGAGAGCTTCAGTTGTCCATCCTGTAAGTGATGGACAGAAAAAGATGCCACCTAAGAAGAAAATTCTTGATCCACAGGGTCCAGTCCTTCAGAAATGGAACAAAATCTTTGTAATAACTTGTGTGATGGCAGTCTCTGTGGACCCGATCTTCTTTTACATTCCAGTGATTGATAATGCTAAAAAATGCCTTGATTTGAGTGAAACATTGCAGATCACTGCCAGTGTTCTTCGCACCTTCTTTGATCTATTCTACATCCTTCGCATCATCTTTCAGTTTAAGACAGGGTTCATTGCCCGTTCTTCTCGTGTTTTTGGAAGGGGTGAGCTCATTGATGATCCAGTGGCTATAATGAAAAGATACTTAACTTCACACTTCGTCATTGATATTCTATCAATTATTCCACTTCCACAGGTGATTGTTTTAGCCATAAATCCAAACCTGAAAACATCAGATCCATTTGTAGCAAAGGATTTGTTGAAGTATACAGTATTAATCCAGTATGTGCCAAGGCTTTGGCGGATCTATCCACTATTCAAAGAAGTAACAAGAACTTCTGGCATATTGACTGAGACAGCGTGGGCTGGAGctgcttttaatctttttctctataTGCTAGCAAGCCATGTGGTTGGAGCTATCTGGTACATGCTTTCGATAGAGTCAGAGAGTGCTGGCGCAGAGAGTTGA 876 0.3973 MNAKGHKFVRFEDWKSESSFSIEQEDSINHGNHKRKARPSVSAVLKSIGRRLESGSEKMKNLRRASVVHPVSDGQKKMPPKKKILDPQGPVLQKWNKIFVITCVMAVSVDPIFFYIPVIDNAKKCLDLSETLQITASVLRTFFDLFYILRIIFQFKTGFIARSSRVFGRGELIDDPVAIMKRYLTSHFVIDILSIIPLPQVIVLAINPNLKTSDPFVAKDLLKYTVLIQYVPRLWRIYPLFKEVTRTSGILTETAWAGAAFNLFLYMLASHVVGAIWYMLSIESESAGAES 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0134 291 Gene3D - 96 290 - -
Ssu4g0134 291 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 285 - -
Ssu4g0134 291 MobiDBLite consensus disorder prediction 17 42 - -
Ssu4g0134 291 SUPERFAMILY Voltage-gated potassium channels 86 281 - -
Ssu4g0134 291 Pfam Ion transport protein 95 283 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ssu4g0134 291 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0134 Ssu-Chr4 2190514 2277089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0134 1 286 Ion Channels AT5G53130 55.172 1.75e-110 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0134 K05391 - gmx:100816236 500.36