Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g0105 | ATGTATGACAGTTATAAGGGCTTTGATGAAGTTGACGGAATAGAAGTTGCTTGGAACCAAGTTTGGATTGATGAAATCCTACAATCAATAGATGATCTTGCGAAGTTGCATTCCGAAGTTAATCTCTTGAAATACCGTAAAAGGCATAGATATGTTGACATAAAAGCCATAAGAGGTTGGGCTAGACAAATTCTTCAAGGCTTGGTATACCTTCATAGTCACAATCCTCCTATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGCAAACCATGGAGAAGTTAAGATAGGAGACTTTGGTTTGGCAATTGTCATGCAACAACCAACTGCTCGAAGTGTTATTGgGACTCATAAATTTATGGCTCCAAAACTATATGAAGAGGAATACAATGAACTTGATGATGTCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTCTTGAGTACCCGTATAGTGAATGCAAAAATCCAACCcaaatttttaagaaagtaaCCTCTGGCATTGAACCTGCATCCCTTAAAAGGGTGAGTGATCCCCAAATTAAGGAGTTTATTAAGAAGTGTCTCGTTTCAATATCCAAGAGATTGTCTGCAAAGGATCTTCTTAAAGACCCATTTCTGCATGTTTAG | 642 | 0.366 | MYDSYKGFDEVDGIEVAWNQVWIDEILQSIDDLAKLHSEVNLLKYRKRHRYVDIKAIRGWARQILQGLVYLHSHNPPIIHRDLKCDNIFVNANHGEVKIGDFGLAIVMQQPTARSVIGTHKFMAPKLYEEEYNELDDVYSFGMCILEMVTLEYPYSECKNPTQIFKKVTSGIEPASLKRVSDPQIKEFIKKCLVSISKRLSAKDLLKDPFLHV | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g0105 | 213 | Gene3D | Transferase(Phosphotransferase) domain 1 | 37 | 213 | - | - | |
Ssu4g0105 | 213 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK8-RELATED | 5 | 44 | - | - | |
Ssu4g0105 | 213 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 41 | 212 | - | - | |
Ssu4g0105 | 213 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK8-RELATED | 41 | 212 | - | - | |
Ssu4g0105 | 213 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 5 | 44 | - | - | |
Ssu4g0105 | 213 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 211 | IPR011009 | - | |
Ssu4g0105 | 213 | Pfam | Protein kinase domain | 42 | 211 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g0105 | 213 | ProSiteProfiles | Protein kinase domain profile. | 1 | 211 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g0105 | 213 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 78 | 90 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu4g0105 | 213 | SMART | serkin_6 | 5 | 211 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu4g0105 | Ssu-Chr4 | 1704193 | 1705412 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g0105 | 5 | 211 | MAP Kinase Kinase Kinase | AT5G41990 | 60.494 | 3.98e-92 | 278 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | WNK_NRBP | Ssu4g0105 | Pkinase | 5.5e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g0105 | K08867 | - | gmx:100809602 | 322.013 |