LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu4g0104	ATGGACTTAAATGCTGACTACCAACACACATCTTTGAGTGCCTGTGTTGATGAAAGCAGCCAGGAAAGTCCACATTGTCTAGTTCATGAAGTTCAAAAGGTGTATAAGAACAACGAGTTTAGGTTGAAAGGGACCAAAAATGATGATAACTCAATATCATTGATCTTGCATATTGCTGATTTATGTGGTCGAGTAAGGATTATACATTTTCTCTTTTACCTTAAGATGAACACTGCAGTCTCTGTTACCTCACAGATGGTTGAAAATTTGGAGCTAGAAAATAATGATGTAACTTTCATAATTGAGCTTATTGATTACTTAATAATGAAACTTGTACCTAGGTGGAAACCCTCATTTGATTATTCCTTAAGTGGAAGATTATGTCAGTGTGCTGGCTCTCCAACACTTGGAGATAGTCAAGCCTTAATTTCATGCTCATGGGGTCCTGTTCTAGCTAGTGTTCCATCTGAATTACTTTGGGATCAAGATAACTCATATGGGTTTAACACTACTCAAAGAGAAGGTTTTGCAACAAGTGCAAAGGGCTACATATTGATAAAGTTACTCTTGAGAGTAAGCATAATTCTTCTTTTAGTTTGTCTAGCTTGGAAGATCGATATTCAGAAGAATCCACAGCTTCTAATATAG	648	0.3642	MDLNADYQHTSLSACVDESSQESPHCLVHEVQKVYKNNEFRLKGTKNDDNSISLILHIADLCGRVRIIHFLFYLKMNTAVSVTSQMVENLELENNDVTFIIELIDYLIMKLVPRWKPSFDYSLSGRLCQCAGSPTLGDSQALISCSWGPVLASVPSELLWDQDNSYGFNTTQREGFATSAKGYILIKLLLRVSIILLLVCLAWKIDIQKNPQLLI	215

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu4g0104	215	PANTHER	KINASE DOMAIN PROTEIN	13	182	-	-
	Ssu4g0104	215	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	13	182	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu4g0104	Ssu-Chr4	1703289	1704105	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu4g0104	30	116	MAP Kinase Kinase Kinase	AT1G49160	55.172	3.07e-25	100

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu4g0104	K08867		-	gmx:100272197	189.119