Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0093 ATGACGACCCACATTGACGATAACCTCTGGCTCGTCGCTCTGGCCTCCCAAGGAAACCTTGCATGGGCCCTCTTGATCATGGCCTCCCTCTGGTTGGCCATGACTTTCTTTCACTGGTCACACCCCGGTGGTCCTGCCTGGGGCAAGTACTTCTACTCCACCTGGAGAAAAacccaaacctcaccaaaccCAATGATTCCGGGGCCCAAAGGCTGGCCCCTGATTGGGAGCATGGGCCTCATGACTTCCCTGGCCCATCACGGTATTGCGGCCGCCGCCACCGCATGCAGAGCCGAGCGCCTCATGGCCCTCAGCCTCGGCTACACACGTGTCATCGTCACGTGCCACCCCGACGTCGCCAAGGAGATTCTCAACAGCTCCGTCTTCGCCGATCGCCCCGTCAAGGAATCCGCATACAGTCTCATGTTCAACCGCGCAATCGGCTTCGCCTCTTACGGAGTTTACTGGCGAACCCTCAGGAGAATCGCCGCCAACCACTTCTTCTGCCCCAGGCAAATCAAAGCCTCCGAACTCCAACGCTCTGAAATCGCCACGCAAATGGTTGGCATGCTCAGAAACAACCGCCAACAGACTTTACGTGTTCGCCAGGTGCTGAAAAAGGCGTCGCTCAGTAACATGATGTGCTCCGTGTTTGGACAGGAGTATAAGCTGCACGAGCCAAACAGCGGAATGGAAGACCTTGGACGATTACTGGACGAGGGGTATGACTTGTTGGGCCTGTTCAATTGGGCCGACCACCTTCCTTTCCTTGCACATTTCGACCCCCAAAAAATCCGCTTCAGGTGTTCCAACCTGGTCCCCATGGTGAACCGCTTCGTCAGCAGAATCATCGCTGAACACCGAGCTCGTAAAACCCAAACCAACTGGGACTTCGTTGACGTCTTGCTCTCTCTCCCCGGACCCGATCAATTATCACACTCCGATATGATTGCCGTGCTTTGGGAAATGATATTTAGGGGAACGGACACGGTGGCGGTTTTGATCGAGTGGATACTAGCAAGGATGGTGCTTCATCCTGATGTGCAGTCCAAAGTTCACGAGGAGCTGGATGCGGTGGTTGGAAGGTCACGCGCCGTCGTGGAGGATGACGTGGCAGCGATGACATACCTGTCAGCGGTGGTGAAGGAAGTGCTGAGGCTCCACCCGCCGGGCCCACTTCTGTCTTGGGCCCGCTTGTCCATCAAGGATACGACCATTGATGGGTATCACGTGCCTGCGGGGACCACTGCTATGGTGAACATGTGGGCTATTTGCAGAGACCCACATGTGTGGAGGGACCCACTCGAATTTATGCCCGAGAGGTTCGTCACGGCGGGGGGAGATACGGAGTTCTCCATCCTCGGGTCGGATCTAAGGTTGGCCCCGTTCGGGTCGGGTAGGAGGGTGTGCCCCGGGAAGGCGCTGGGGTTGGCTACGGTGAACTTTTGGGTGGCGTCGCTCTTGCATGAATTTGAATGGGAACCGTCTGATGAGAAGGGGGTTGATCTGACGGAGGTGCTGAGGCTCTCTTGCGAAATGGCTAACCCTCTTACCGTGAAGGTGCGCCCCAGGCGTGGATGA 1581 0.5617 MTTHIDDNLWLVALASQGNLAWALLIMASLWLAMTFFHWSHPGGPAWGKYFYSTWRKTQTSPNPMIPGPKGWPLIGSMGLMTSLAHHGIAAAATACRAERLMALSLGYTRVIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFASYGVYWRTLRRIAANHFFCPRQIKASELQRSEIATQMVGMLRNNRQQTLRVRQVLKKASLSNMMCSVFGQEYKLHEPNSGMEDLGRLLDEGYDLLGLFNWADHLPFLAHFDPQKIRFRCSNLVPMVNRFVSRIIAEHRARKTQTNWDFVDVLLSLPGPDQLSHSDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPDVQSKVHEELDAVVGRSRAVVEDDVAAMTYLSAVVKEVLRLHPPGPLLSWARLSIKDTTIDGYHVPAGTTAMVNMWAICRDPHVWRDPLEFMPERFVTAGGDTEFSILGSDLRLAPFGSGRRVCPGKALGLATVNFWVASLLHEFEWEPSDEKGVDLTEVLRLSCEMANPLTVKVRPRRG 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0093 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Ssu4g0093 526 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 Pfam Cytochrome P450 67 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 Gene3D Cytochrome P450 58 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PANTHER CYTOCHROME P450 78A6 1 525 - -
Ssu4g0093 526 SUPERFAMILY Cytochrome P450 66 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0093 526 PANTHER CYTOCHROME P450 78A7-RELATED 1 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0093 Ssu-Chr4 1605966 1607797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0093 37 526 Cytochrome P450 AT3G61880 71.660 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0093 K20619 - gmx:100799906 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0093 4 1605966 1607797 Ssu4g0093 4 1605966 1607797 ECH