Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0072 ATGTCGATTGGAGAAACTGCTTGCTCATACGCCGCTCTCATCCTTCACGAAGATGGAATCAACATCACTCGAATGCTGCTGGGGGTGGTGGGGCACCAGTTACTGTTGCTAGCTGCCCCAGTTGCCGCTGCAGGTGGCGGTGCTGCTGCTGCTGCCCCTGCCgctgaggagaaaaagaagGAGGAGCCTGAAGAAGAGAGTGACGATGATATGGGATTCGGCTTGTTCGATTAG 234 0.5171 MSIGETACSYAALILHEDGINITRMLLGVVGHQLLLLAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0072 77 MobiDBLite consensus disorder prediction 62 77 - -
Ssu4g0072 77 Gene3D - 1 62 IPR038716 -
Ssu4g0072 77 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 37 77 - -
Ssu4g0072 77 MobiDBLite consensus disorder prediction 50 77 - -
Ssu4g0072 77 Pfam 60s Acidic ribosomal protein 27 76 - -
Ssu4g0072 77 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 37 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0072 1 77 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 36.036 2.19e-10 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0072 K02942 K02943 gmx:100791962 56.225