Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0064 ATGCAAGCTGAAGTTCAAAGCCAAATATATATTTGTGGGGAAGCACCATGTGGGTTCTCAAATGCTGGATCCGTCTCTAAGGATTTAGAAGAACGATCAGCTTCCATGTGGAAGCTTTTGATGGCGGTGGTTCTTTGCATCATTTTCATGAGCATTGAAGCGGTTGGGGGCATTAAAGCTAATAGCTTTGCAATTTTGACTGATGCAGCCCATTTGCTTTCAGATGTTGCAGCATTTTCCATCTCCTTGTTTTAA 255 0.4196 MQAEVQSQIYICGEAPCGFSNAGSVSKDLEERSASMWKLLMAVVLCIIFMSIEAVGGIKANSFAILTDAAHLLSDVAAFSISLF 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0064 84 PANTHER METAL TOLERANCE PROTEIN A1 9 84 - -
Ssu4g0064 84 Pfam Cation efflux family 39 84 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Ssu4g0064 84 Gene3D Cation efflux protein transmembrane domain 37 84 IPR027469 -
Ssu4g0064 84 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 9 84 - -
Ssu4g0064 84 SUPERFAMILY Cation efflux protein transmembrane domain-like 33 84 IPR027469 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0064 11 84 Inorganic Solute Cotransporters AT2G46800 75.676 9.73e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0064 K14689 - twl:119986415 124.02