Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g0038 | ATGGCTGAGGAACTGGATAAACCTTTGCTTGATCCTGAGAATTTCAACCGAGAGGGCATTGACTTGGAGCGTATACCATTAGAAGAAGTATTTGAACAGTTGAGAACATCAAGAAGAGGACTTTCATCTGATGATGCTGAAGCCCGAATACAGATATTTGGCCCAAACAAACTTGAAGAGAAGAAAgagaataaaatattgaaatttcttaGTTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCAGCATTGATGGCTATTATCCTTGCTAATGGCGGAGTGAGTAGAGAACATAATCATTGTTCTTCAAATATATGA | 324 | 0.3704 | MAEELDKPLLDPENFNREGIDLERIPLEEVFEQLRTSRRGLSSDDAEARIQIFGPNKLEEKKENKILKFLSFMWNPLSWVMEAAALMAIILANGGVSREHNHCSSNI | 107 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g0038 | 107 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 20 | 92 | IPR023298 | - | |
Ssu4g0038 | 107 | SMART | Cation_ATPase_N_a_2 | 21 | 93 | IPR004014 | - | |
Ssu4g0038 | 107 | Gene3D | - | 72 | 107 | - | - | |
Ssu4g0038 | 107 | Pfam | Cation transporter/ATPase, N-terminus | 25 | 87 | IPR004014 | - | |
Ssu4g0038 | 107 | PANTHER | ATPASE 10, PLASMA MEMBRANE-TYPE | 1 | 96 | - | - | |
Ssu4g0038 | 107 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 96 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu4g0038 | Ssu-Chr4 | 710070 | 711560 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g0038 | 1 | 82 | Primary Pumps ATPases | AT1G17260 | 74.390 | 1.47e-39 | 137 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g0038 | K01535 | - | gmx:100795836 | 171.014 |