Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0022 ATGAACGAGACCTTGGAGTACCGTTCTCCGAGAGACTCCGACGGTCACGGAACCCACACGGCTTCCATCGCCGCCGGAAGGTACGTGTTCCCGGCCTCCACCATGGGCTACGCCAAAGGAATGGCCGCCGGGATGGCTCCCAAGGCTCGCCTCGCCGTCTACAAGGTCTGCTGGAACGCCGGCTGCTACGACTCCGACATCCTCGCCGCATTCGACGCCGCCGTGGCGGACGGCGTGGACGTGGTGTCCCTCAGCGTCGGGGGCGTGGTGGTGCCCTACCACCTGGACGTCATCGCCGTGGGGGCCTTCGGAGCCTCCGAGGCTGGCGTTTTCGTGTCTGCCTCGGCAGGCAACGGCGGTCCCGGCGGCCTCACGGTGACCAATGTGGCACCCTGGGTGACCACTGTGGGTGCGGGAACCATAGACAGAGATTTCCCCGCGGATGTCATGTTGGGGAATGGCAAGGTGATTAGTGGGGTGAGTGTGTACGGTGGACCGGGTCTGACTCCGGGTCGGCTCTACCCGCTCGTGTACGCGGGTTCAGATGGTTACTCTTCCTCTCTTTGCTTGGAAGATTCGTTGGATCCCAAGTCTGTGAGAGGGAAGATTGTTGTGTGCGACAGAGGCGTCAATTCAAGAGCTGCCAAAGGCCAGGTGGTAAAGAAGGCCGGAGGAGTTGGCATGATCTTGACCAACGGACCCTTCGACGGTGAAGGTTTGGTGGCCGACTGCCACGTCCTCCCCGCGACCTCCGTGGGTGCCGCTGGCGGCGACGAGATTCGGAGATACATCTCTCTGGCTTCAGAGTTACGGTCACCGGCGAGCGCAACCATCATATTCAAGGGCACAAGGGTTGGGATTAAGCCAGCGCCAAAGGTGGCATCTTTCTCGGCGAGAGGGCCTAATCCTGAGTCCCCTGAGATTCTGAAGCCGGATGTTATAGCTCCGGGGTTGAACATTCTTGCGGCTTGGCCTAATACGGTTGCCCCTTCTGGGGTTCCTTCTGACGAGCGTAGGACTGAGTTTAACATACTGTCGGGCACTTCAATGGCTTGCCCACACGTTTCTGGTTTGGCTGCTCTGTTGAAAGCGGCGCACCCGGATTGGAGTCCTGCTGCCATCAGATCTGCCCTCATCACTACTGCCTACACTCTGGACAAGAGGGGAGGGCCTATCCTGGATGAGTCTACAGGGAATGTTTCCTCCGTCTTTGATTATGGGGCTGGCCATGTTCATCCCGAGAAGGCCATCAACCCTGGCCTCATTTATGACATCTCTACCTACGACTATGTGGATTTCCTCTGCAATTCCAACTATACCGCCCACAATATCAAAGTTATCACCAGAAAGGGTGCAGACTGCAGCGGGGCAAAGAGGGCTGGTCACGCTGGCAATCTCAATTACCCCTCTTTATCTGCCGTGTTTCAACAATATGGAAGGGAACACATGTCCACACACTTCATTAGAACTGTCACTAATGTTGGAGACCCCAACTCCGTCTACAAACTCACTATTGCACCCCCTCCCGGCACCCTCGTCACCGTCCAACCCGACACGCTAGCTTTCCGGAGGTTGGCTCAGAAATTGAACTTCCTTGTTAGGGTGCAAACCACGGCAGTTAAGCTTTCCCCTGGAAGTTCTACGGTCAAGAGTGGTTCCATAGTTTGGTCGGATGGCAAGCACACTGTCACAAGTCCCTTGGTTGTCACCATGCAGCAGCCTCTCTAA 1728 0.5712 MNETLEYRSPRDSDGHGTHTASIAAGRYVFPASTMGYAKGMAAGMAPKARLAVYKVCWNAGCYDSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDVIAVGAFGASEAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVMLGNGKVISGVSVYGGPGLTPGRLYPLVYAGSDGYSSSLCLEDSLDPKSVRGKIVVCDRGVNSRAAKGQVVKKAGGVGMILTNGPFDGEGLVADCHVLPATSVGAAGGDEIRRYISLASELRSPASATIIFKGTRVGIKPAPKVASFSARGPNPESPEILKPDVIAPGLNILAAWPNTVAPSGVPSDERRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALITTAYTLDKRGGPILDESTGNVSSVFDYGAGHVHPEKAINPGLIYDISTYDYVDFLCNSNYTAHNIKVITRKGADCSGAKRAGHAGNLNYPSLSAVFQQYGREHMSTHFIRTVTNVGDPNSVYKLTIAPPPGTLVTVQPDTLAFRRLAQKLNFLVRVQTTAVKLSPGSSTVKSGSIVWSDGKHTVTSPLVVTMQQPL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0022 575 Pfam Subtilase family 3 399 IPR000209 GO:0006508|GO:0008236
Ssu4g0022 575 ProSitePatterns Serine proteases, subtilase family, serine active site. 347 357 IPR023828 -
Ssu4g0022 575 SUPERFAMILY PA domain 174 253 IPR046450 -
Ssu4g0022 575 PRINTS Subtilisin serine protease family (S8) signature 12 25 IPR015500 -
Ssu4g0022 575 PRINTS Subtilisin serine protease family (S8) signature 346 362 IPR015500 -
Ssu4g0022 575 Pfam PA domain 174 260 IPR003137 -
Ssu4g0022 575 ProSiteProfiles Serine proteases, subtilase domain profile. 1 417 - -
Ssu4g0022 575 Gene3D Peptidase S8/S53 domain 5 430 IPR036852 GO:0004252|GO:0006508
Ssu4g0022 575 CDD PA_subtilisin_like 151 265 - -
Ssu4g0022 575 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 5 575 - -
Ssu4g0022 575 SUPERFAMILY Subtilisin-like 6 421 IPR036852 GO:0004252|GO:0006508
Ssu4g0022 575 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 5 575 - -
Ssu4g0022 575 Gene3D - 434 572 - -
Ssu4g0022 575 Gene3D - 142 286 - -
Ssu4g0022 575 Pfam Fibronectin type-III domain 465 569 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0022 Ssu-Chr4 523232 524959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0022 1 575 Subtilisin-like Serine Gene Family AT3G14240 78.830 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0022 - - gmx:100784180 1034.25