Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0015 ATGGGAAGTCCAAAATTCCGTTTCTGTTTCCTAGTTCTTTTTGTAAGCTATGGCTTACTGACTCCAACTTGCTGCCTTGGTGATATATGCCAGCCCAAAGAACACGCTGCATTATTTGTATTTGGAGATTCATTATTTGATGTTGGAAACAACAATTACATCAATACTACTGCTGATAATCAGGCAAATTACTCTCCATATGGGGAAACCTTCTTCAAGTATCCAACTGGTAGATTTTCTGATGGACGCGTGCTTCCAGATTTCATAGCTGAGTATGCTAAGTTGCCGCTAATCCAACCGTATCTATTTCCTGGTATCAACGATACGTTGATGGAGTCAATTTTGCATCAGCAGGAGCTGGGGCTTTGGTTGAAACCCATCAAGGACTGCTATGGCATATTGATTCCAACTTGCTGCCTTAGTGATATATGTCAGCCAAAAGAACACGCTGCAGTATTTGTATTTGGAGATTCATTATTTGATGTTGGAAACAATAATTACATCTATACTACTGCTGATAATCAGGCCAATTACTCTCCATATGGGGAAACCTTCTTCGAGTATCCAACAGGTAGATTTTCTGATGGACGCGTGCTTCCAGATTTCATAGCTGAGTATGCTAAGTAG 627 0.4035 MGSPKFRFCFLVLFVSYGLLTPTCCLGDICQPKEHAALFVFGDSLFDVGNNNYINTTADNQANYSPYGETFFKYPTGRFSDGRVLPDFIAEYAKLPLIQPYLFPGINDTLMESILHQQELGLWLKPIKDCYGILIPTCCLSDICQPKEHAAVFVFGDSLFDVGNNNYIYTTADNQANYSPYGETFFEYPTGRFSDGRVLPDFIAEYAK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0015 208 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 106 IPR044552 -
Ssu4g0015 208 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 139 208 IPR044552 -
Ssu4g0015 208 Pfam GDSL-like Lipase/Acylhydrolase 38 96 IPR001087 GO:0016788
Ssu4g0015 208 Pfam GDSL-like Lipase/Acylhydrolase 152 206 IPR001087 GO:0016788
Ssu4g0015 208 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 139 208 - -
Ssu4g0015 208 Gene3D SGNH hydrolase 27 114 IPR036514 -
Ssu4g0015 208 Gene3D SGNH hydrolase 140 208 IPR036514 -
Ssu4g0015 208 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0015 Ssu-Chr4 407780 411056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0015 150 205 Pollen Coat Proteome AT1G75930 50.877 7.24e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0015 - - gmx:100785243 202.601