Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0009 ATGTCTAGAGAAGCAGATCGAACGAGGATCGAGGAAGATATGGACACGGGAAAGGAGACATCGGAGAAGAACCTGAAGCTGAAAGACCGAAAGGTATCATGGGCAAAGCTACGCCGCGTAGATTCTCTCAATTTGGAGGCTGGAAGAGTTTCTATGGTTGCACACAATCCCTACAAGATGGGTTGGAGAATGACGCTGAGCTTAGCATTTCAAAGCATAGGGGTTGTGTATGGTGATATTGGTACATCTCCCCTTTATGTGTTTGCCAGCACCTTCCCCAATCAAATTAAGAACAATGATGACATTCTTGGTGTCTTGTCTCTCATCATCTATACCATTGTGCTCATACCCATGCTTAAATATGTCTTCATCGTATTGTGGGCCAACGACAATGGCAACGGTGGAGCGTTTGCACTCTATTCGTTAATATGTAGGCATATGAAGATGAGTTTGATTCCAAATCAACAACCAGAAGACAGGGAGCTTTCTAACTACAAACTCGAAACACCGTCTAGCCAAGTGAAACGAGCCCATAAACTAAAACAGAAGCTTGAGAATAGTCATTTTGCGCGGATTGTGCTTGTACTTCTAGCTATAATGGGAACTTCCATGGTCATAGGAGATGGGATTCTTACTCCATCAATTTCAGTGCTTTCTGCCGTAAGTGGGATCAGTACATCATTAGGTGAAGaTGCTGTTGTGGGGATCACTATAGCAATCTTGATAGTCCTATTTTCTATACAACGGTTCGGTACTGATAAAGTGGGATTCTCATTCGCTCCAATTATTTTGGTGTGGTTTTCATTCATCAGTGGAATTGGCCTTtacaatttattcaaatatgacATTGGAGTATTACGTGCTTTtaatccaaaatatatatatgattacttCAAACGGAACGGCAAGCAAGGGTGGATATCACTTGGTGGAGTCTTTTTATGCATAACAGGATCCGAGGCCATGTTTGCTGACTTGGGTCACTTTAATGTACGAGCCATTCaaATTAGCTTTTCTTGCATTACATGTCCTGCAATATTGGCTGCATACATTGGGCAAGCAGCATTTCTACGGAAGTTCCCTGGGAAAGTAGCTAATACTTTCTATGATAGTATACCGCATCGCTTATATTGGCCTACATTTGTTGTCGCTGTTGCTGCTGCCATTATAGCCAGTCAGGCAATGATTTCAGGAGCATTTTCCATTATATCCCAGGCCCTAAGTCTAGGTTGTTTCCCAAGAGTTAAGGTAGTGCATACTTCCATTAAACATCAGGGTCAGGTGTATATTCCTGAGATCAACTACATGTTCATGATCGCCTGTATTGTGGTCTGTGCTGCCTTCAAGACCACAGAAAAGATTAGCCATGCATATGGGATTGCAGTTATTGGTGATATGCTGATCACAACAACTCTGGTTACGCTTATAATGCTAGTTATATGGAAAAAGAGTCTATGGCGCGTGGCTCTCTTCTTTTTGACATTCGGTTTTGTTGagtttctttatttctcttctcaacTAACCAAGTTCACAGGAGGAGGGTATCTTCCACTTGCATTAGCTCTGTTCTTGACGACAGTGATGGGAATCTGGCATTATGTGCACAAAGAAAGATACATGTTTGAACTAAAGAACAAGGTTTCTAGTGCGTATTTGAATGAAGTGGCCAACAACACAGACATAAGGCGAGTGCCCGGAATTGGACTTCTGTATTCTGAGTTAGTACAAGGCATTCCTCCTATATTCCCACACTTAATAAGCAGCATACCATCTATCCATTCGGTTGTTGTGTTTGTCTCGATTAAGGCAATTCCTGTTAGTGGAGTTGCATCAGAGGAGAGGTTTTTGTTTCGGCAGGTGGAGCCAAGAGAGTATAGAATTTTTCGTTGTGTTGTGAGGCATGGTTACAATGACGTGCTTGAGGATCCTGCGGAGTTTGAGTCACAGTTAATACAAAATCTGAAGGCATTCATTCAAGAAGAGAACTATTTGCTTGAGGTTGAGGAAACTGCAACTGAACAGGCACCAGCAGTGCCTGTGGCTTCTACCAATGAGAGTGAGATGGCAGGTAAAGAAGGAAAGGGTAGGTCCACTACCAGTTCTTCCCCCAGAATAGTCCCAAATCAAGCTGCGTCTGCAGCCTTATTCGACTCCATTCAATCACTGGGTGCGAGTGCGACCAAATCATCCACTTTCCTTGCCCCGCCCATCCAGGGAGCTGAAGAGGAAATCAAAATCGTAGACAAAGCGTTGGAGAAGGGCGTGGTGTATATGCTAGCGGAAGCAGAGGTAGTAGCTCACCCAAATTCCTCCATCTTGAATAAGATTGTTGTCAACTATGCTTATAGCTTCTTGAGAAAGAACTTTAGGCAAGGACAGAATTTGCTGGCAATCCCACGCAACAGACTTCTCAAGGTTGGAATGACATATGAAATATGA 2439 0.4219 MSREADRTRIEEDMDTGKETSEKNLKLKDRKVSWAKLRRVDSLNLEAGRVSMVAHNPYKMGWRMTLSLAFQSIGVVYGDIGTSPLYVFASTFPNQIKNNDDILGVLSLIIYTIVLIPMLKYVFIVLWANDNGNGGAFALYSLICRHMKMSLIPNQQPEDRELSNYKLETPSSQVKRAHKLKQKLENSHFARIVLVLLAIMGTSMVIGDGILTPSISVLSAVSGISTSLGEDAVVGITIAILIVLFSIQRFGTDKVGFSFAPIILVWFSFISGIGLYNLFKYDIGVLRAFNPKYIYDYFKRNGKQGWISLGGVFLCITGSEAMFADLGHFNVRAIQISFSCITCPAILAAYIGQAAFLRKFPGKVANTFYDSIPHRLYWPTFVVAVAAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSIKHQGQVYIPEINYMFMIACIVVCAAFKTTEKISHAYGIAVIGDMLITTTLVTLIMLVIWKKSLWRVALFFLTFGFVEFLYFSSQLTKFTGGGYLPLALALFLTTVMGIWHYVHKERYMFELKNKVSSAYLNEVANNTDIRRVPGIGLLYSELVQGIPPIFPHLISSIPSIHSVVVFVSIKAIPVSGVASEERFLFRQVEPREYRIFRCVVRHGYNDVLEDPAEFESQLIQNLKAFIQEENYLLEVEETATEQAPAVPVASTNESEMAGKEGKGRSTTSSSPRIVPNQAASAALFDSIQSLGASATKSSTFLAPPIQGAEEEIKIVDKALEKGVVYMLAEAEVVAHPNSSILNKIVVNYAYSFLRKNFRQGQNLLAIPRNRLLKVGMTYEI 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0009 812 MobiDBLite consensus disorder prediction 674 704 - -
Ssu4g0009 812 MobiDBLite consensus disorder prediction 1 22 - -
Ssu4g0009 812 Pfam K+ potassium transporter 69 638 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu4g0009 812 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 26 811 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu4g0009 812 PANTHER POTASSIUM TRANSPORTER 5 26 811 - -
Ssu4g0009 812 TIGRFAM kup: potassium uptake protein 68 812 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0009 Ssu-Chr4 316297 324478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0009 11 812 Inorganic Solute Cotransporters AT4G13420 58.736 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0009 K03549 - gmx:100814313 1334.7