Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3359 ATGGCAGCCGACAATTCCGCTACTCCTCTCTCCAGCACCATCCCCGTGCCCCCAAAATCTCTTGTATTAATGCTAATTCCCCTTTTCTCCTCTCTTTACCCACTGTCACTCAATGAAATCATTGTTATAATATCTTCTTTTATAGATTTTCTTACACGAATGGTGGCTTGTGAAGCAACACAAGGGTTTAGCCGTTGGCGGCGTTGCTTCGGTGGAgtaagttctttttattttatttatttgttgctttCAATTTGTTCATTCTGGATATGGAAATGGAATTGGAAtgcttctctctctccctatgGAGGAGTAATTGCAATTAGTACGCAGCGCaggagagatagagaaagagtgttTTTGTCTACAGTGATTGCAGAGAGAGAAGAGGCCAATGTCCTCCGCACTGAAGATGGCATCACTATTCTTTTCCGTGGTTTCATCAACACCTCTCGTTCATGTCAAAATGGCGTCCCCTCCGAGGTATGTCAACACTTCTTGGTTGGATTTCCACACGATTGGAAAAAGTATTCGGCTCATAGTTTTGGAAATGAAGATATCGATGGGGTTACTGCGTTTGGTGACTCAAGTGCTTGTTCAAAGAAGAGGGATGATGATGCTTTGCCATTTTCTATTCACGATAATGATTGCACCAAGAGACAGGATTCTATATTGTCCAATAATTGTTTGGCACCAAAAAACATTTGCAATGGACTGGGAATTTCTTTTGGAAATGATTCCAAGCAATCTGAATCAACTGATAACATGGAATGTAGCATTGTCATGAAGACTATGGAATGTGAATGTGACAATACAGCGAGTCTTAACTCGTCCCAGCTGCAGGTTGACATATACAATGGTGAAAAAGGAATCTCAGATGTTGCAGTTGAAAGCCAAGCTGGAAATCCAAAAAGTGGTCAATCCTTGATGGGTATGTATGATTCTCACACGTGTACAGGAGCTTCTGGAAAAAACACGGTTAAACCTCCAATTTccacaaagaaaatgaaaaaagaccaGTTCTCAGGTGACCGTAAGGAGAAGCAACGTATCAGACAAAAGATACTATTGGATGCCAGCAATTCCTGTAGTAGGATGGTAACGAGAAGCATTTCCAAAAGAAGTCACACAATGCCTAAAGAAGACGATAAAGATACAGTAGCCAGTGTTATTTCTCCAGTTAGAAGATCTCCCAGGCTTTATAGTTGTAGATAA 1215 0.3819 MAADNSATPLSSTIPVPPKSLVLMLIPLFSSLYPLSLNEIIVIISSFIDFLTRMVACEATQGFSRWRRCFGGVSSFYFIYLLLSICSFWIWKWNWNASLSPYGGVIAISTQRRRDRERVFLSTVIAEREEANVLRTEDGITILFRGFINTSRSCQNGVPSEVCQHFLVGFPHDWKKYSAHSFGNEDIDGVTAFGDSSACSKKRDDDALPFSIHDNDCTKRQDSILSNNCLAPKNICNGLGISFGNDSKQSESTDNMECSIVMKTMECECDNTASLNSSQLQVDIYNGEKGISDVAVESQAGNPKSGQSLMGMYDSHTCTGASGKNTVKPPISTKKMKKDQFSGDRKEKQRIRQKILLDASNSCSRMVTRSISKRSHTMPKEDDKDTVASVISPVRRSPRLYSCR 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3359 404 MobiDBLite consensus disorder prediction 332 349 - -
Ssu3g3359 404 MobiDBLite consensus disorder prediction 321 349 - -
Ssu3g3359 404 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 105 403 - -
Ssu3g3359 404 Pfam SANTA (SANT Associated) 111 177 IPR015216 -
Ssu3g3359 404 PANTHER MIS18-BINDING PROTEIN 1 105 403 IPR039110 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ssu3g3359 SANTA 3.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3359 - - gmx:102668053 318.161