Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3334 ATGGCTCATTTATTGGCGAGCAACCCCAATGCTTCACATAAACTTACCTGCTCAAACTTGGGGTATGGTGTTAGAACAGGATCCAGAAGTGCGTGTTACAGAGTGGGAAGGAAAAGTCGAGGTGGCGGGAGTGGTTTGGTGTTGCAATGCTGCAGCAGCACAAGTAGTTCACAATTACCTTGTGCTGATCAGGATGTGAGGTTGCAGATTGAGAATGGTAGCAGTGGAAAGCTTAAGCAGCAGTTTGAGTATTTGGTGTGTGAATATGGGTGGAGAGTAAGGAGACTATTTGAAAATGCAGATGAGATAAGGAAGGTATCTCAAGTCCAGGCCGAAGCATTCCATGTTCCTGTGTCTCTTTTCAACCACTTGTTCTTCCAATTCTTTCAGGCCGAAGTGCTTTCGGGGCTCCTTTACAAGCTTAAAAACTCACCTCCTAATAGGTATGCTTGTTTGGTAGCTGAGCCAGCAAAAGACGATCCAGATTCACCAAAACAACTTGTTGGTGTCATAGATGTCACTGTCTTGAGAGACCAAAATGTGCTTCAACATCTTCCACCTGAAGCTGAAGAGTACCTTTACATATCAGGAATAGCCGTCTCCAAAACTTTCAGGAGGAGGAAAATAGCGACTGCTCTGTTGAAAGCCTGTGACATGCTTTCCATTTTGTGGGGTTTTGAGTTTCTTGCCCTACGAGCCTATGAAGAAGATCTAGGTGCACGCAAATTGTATGCAAATGCTGGGTACCAAGTTGTGTCTCGAGATCCACCATGGACAAGTAATTGGATTGGAAGGAAATGTCGTGTTCTTATGATCAAAAGAACTAGTTTGCCCAAATAG 840 0.4429 MAHLLASNPNASHKLTCSNLGYGVRTGSRSACYRVGRKSRGGGSGLVLQCCSSTSSSQLPCADQDVRLQIENGSSGKLKQQFEYLVCEYGWRVRRLFENADEIRKVSQVQAEAFHVPVSLFNHLFFQFFQAEVLSGLLYKLKNSPPNRYACLVAEPAKDDPDSPKQLVGVIDVTVLRDQNVLQHLPPEAEEYLYISGIAVSKTFRRRKIATALLKACDMLSILWGFEFLALRAYEEDLGARKLYANAGYQVVSRDPPWTSNWIGRKCRVLMIKRTSLPK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3334 279 Pfam Acetyltransferase (GNAT) family 145 249 IPR000182 GO:0016407
Ssu3g3334 279 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 100 273 IPR016181 -
Ssu3g3334 279 Gene3D - 93 275 - -
Ssu3g3334 279 PANTHER N-ALPHA-ACETYLTRANSFERASE 10 277 - -
Ssu3g3334 279 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 101 276 IPR000182 GO:0016407
Ssu3g3334 279 CDD NAT_SF 166 231 - -
Ssu3g3334 279 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 10 277 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu3g3334 Acetyltransf_1 6e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3334 - - aprc:113864316 480.715