Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu3g3251 | ATGAAAGTCGTAAACCATCGTGCTTACGGTGCCGCTGACAAAGGTGCGTGTTTCAATTTGATTGCTTCTTCTCCTCTCCAGAAAATCGTATCAATTGATCTGCTGAAACGTGATCTAATTTGCATACGCTCTACCATGGACATTGATAATGATTTCACATTTTGTCAGGTAACTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATTGCTGATATTTCCATAGAAGAAGAATCTTCAAATGCAACTAGCACTAGTCGGGATAGTGGTTTTTTGTGGAAGGATGGTTTAACAAAAGATTCCAACTCTAAGAAGGAGGCCACAGTTGGTTCTTTGTCTTTTACTGTATCTAACACAGGTTCAAGTCAGCCAAGTGAATCCACCGCGAAATTAGTACCAAGCGAGGCTAACAATTTGCCTCTCAAGTTGCCGGAACAGAGGAATTCTGCTAAGAAGCCGACGGTTCGGGCCAAAGTTCCTTTTGAAAAAGGCTATAGTCAAATGGACTGGCTCAAGCTTACGCGAACACATCCTGACCTTGCAGGTTTGAAAGGGCAGTCAAACAGGAGACTTATTTCTATGGATGAAGTCAGAAAACACCAGACAGAGGGCCAAGTGTGGACTGTATTAAAAGGCCGTGTTTACAATATATCTCCATATATGAAGTTTCACCCCGGAGgtgttgatatgttgatgaAGGCAGTGGGAAAAGATTGCACATCTCTATTCAATAAATACCATGCTTGGGTTAATGCTGAATTCTTGTTGGACAAATGCTTTGTGGGTACCTTAGATGAAGGTCAGTGA | 813 | 0.4108 | MKVVNHRAYGAADKGACFNLIASSPLQKIVSIDLLKRDLICIRSTMDIDNDFTFCQVTAPVDLETNKLASDIADISIEEESSNATSTSRDSGFLWKDGLTKDSNSKKEATVGSLSFTVSNTGSSQPSESTAKLVPSEANNLPLKLPEQRNSAKKPTVRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNRRLISMDEVRKHQTEGQVWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLDKCFVGTLDEGQ | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu3g3251 | 270 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 191 | 267 | IPR001199 | - | |
Ssu3g3251 | 270 | SMART | Cyt_b5_2 | 194 | 267 | IPR001199 | - | |
Ssu3g3251 | 270 | PANTHER | CYTOCHROME B5 DOMAIN-CONTAINING PROTEIN RLF | 61 | 261 | - | - | |
Ssu3g3251 | 270 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 222 | 229 | IPR018506 | GO:0020037 | |
Ssu3g3251 | 270 | Gene3D | - | 188 | 269 | IPR036400 | - | |
Ssu3g3251 | 270 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 191 | 269 | IPR036400 | - | |
Ssu3g3251 | 270 | MobiDBLite | consensus disorder prediction | 116 | 136 | - | - | |
Ssu3g3251 | 270 | PANTHER | FERREDOXIN | 61 | 261 | - | - | |
Ssu3g3251 | 270 | MobiDBLite | consensus disorder prediction | 116 | 140 | - | - | |
Ssu3g3251 | 270 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 196 | 266 | IPR001199 | - | |
Ssu3g3251 | 270 | PRINTS | Cytochrome B5 signature | 254 | 266 | IPR001199 | - | |
Ssu3g3251 | 270 | PRINTS | Cytochrome B5 signature | 226 | 240 | IPR001199 | - | |
Ssu3g3251 | 270 | PRINTS | Cytochrome B5 signature | 216 | 226 | IPR001199 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu3g3251 | Ssu-Chr3 | 88886318 | 88889715 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu3g3251 | 189 | 267 | NADPH P450 reductases | AT5G53560 | 36.709 | 6.93e-16 | 70.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu3g3251 | - | - | ccaj:109814642 | 407.527 |