Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3191 ATGCAGGAAATTTATGGCGGGTGTTGTGTTAGGAATTTTCTTCTAAATGGCACAGTATGTATTTTGCACCCAAACACTTCAATCCCCTTGATTCAAAGAACCCACACATTAGATGATGTTGCAGCGGCAGAGGGAGAGTGGAACAGCGCGACTATTGTTTTGGTCGTCCTTGGTGGTGAGAGAGATGGAGTAGGCTTGATGGTGTCGTTCATTATGGTCCTTGGCGACATGAGGCTTATTGCCACAACAACATGGAGTTTGAGGGGGAGGGAAAGCTCCTTGAACCGGCATGAGGCATATGAAGCACGTCCAAGCGGGGCGAGAAAAGTCGTGGGGTTAGTCTTTGCATCCAATGCGGTGCTCGTTGACGGCACCACCCCCTCTCACTACGTCAGAAATGGCACTGTCTTTGCTGGCTACCCCACGACCAATCTTAAGATCGCCGTCAAAACCGTCGACGACTTGACCCAAATGCATATGCAGGTTCAGATTATCCTTGTCAGCATCGTGTTCAGGGTGGCACTACCATATGTTCTGATGCCGTTATACATGAACCTCACCAATGATGGATTCCTCTATTGCAAATCCACTGCTCAAGGTTATTGGAATGGTGATCTCCCTCCCACCAAGTTCAATGATTCTGATTTTTGGGAAGATTCCACTTGCTGCCGGAATGGTACTATTTTGTCGTCGTCCGTGGACCCTAGCATGTTGGCTTCGAGAGTTCAGAGAGAGTTTCGGAATCCTGAGGGCCAACATCATAATGTTGGCTGCTTTGCATGA 783 0.484 MQEIYGGCCVRNFLLNGTVCILHPNTSIPLIQRTHTLDDVAAAEGEWNSATIVLVVLGGERDGVGLMVSFIMVLGDMRLIATTTWSLRGRESSLNRHEAYEARPSGARKVVGLVFASNAVLVDGTTPSHYVRNGTVFAGYPTTNLKIAVKTVDDLTQMHMQVQIILVSIVFRVALPYVLMPLYMNLTNDGFLYCKSTAQGYWNGDLPPTKFNDSDFWEDSTCCRNGTILSSSVDPSMLASRVQREFRNPEGQHHNVGCFA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3191 260 PANTHER - 205 243 - -
Ssu3g3191 260 PANTHER - 113 200 - -
Ssu3g3191 260 PANTHER COBRA-LIKE PROTEIN 7 205 243 - -
Ssu3g3191 260 PANTHER COBRA-LIKE PROTEIN 7 113 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3191 Ssu-Chr3 88053988 88055765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3191 205 245 COBRA Gene Family AT4G16120 58.537 2.13e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3191 - - gmx:100803929 97.4413