Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3190 ATGGAAACCTGGTTGGCTGTGACTATTCTGTGCCTTTGCCTTTCGGTAATTCTCAAAGCCATACGTAACGTTCTCTTTCCCCTTTCTCCCCTCCCTCCGGGGCCTCCCAAATGCAACTTTAGATTGCTACGACGATACCTCACCGATCCCAAGACTATTCTTCAAAAACTTCATGTAAAATATGGTCCAATCTTCACTCTTCACGTTGGTTATTCTCACACGGACATTTTCATTGCGAATCGCTTCGTTGCCCATCAAGCTTTGATCCAACATGGCACTATTTTCGCTGATCGCCCCAAGGCCAATCCCACCAACGAGATTATTAGTAGCAACCAACATGACATCCTTTTCAGCTTCTATGGCCCCACATGGCGCCTCCTTAGGCGCAACCTCACTTCAAGAATCCTTCACCCCTCACAGGTCAAGTCCTATGCACATGCACGCAAGTGGGTCTTAGACAATATACTCCTGCAACGCCTCAAATCTGATTCTGATGCAAGCAACCCCGTAAGGGTCATTGACCACTTTCAATACGGCATGTTCAGCTTGCTGGTTTTGATGTGCTTAGGTGACAAACTCGATGAGAAGCAAATAAGGGCAATTGAGGACAGTCAACGTCACATGCTTGTGAGCTTTGCTAGGTACAGTGTCTTGAATTTTTGGCCACCAATCACTAGGATTTTGTTCTGGAAGAGGTGGAAGGAGTTCTTGCAGCTGCGGAGAGAGCAAGAAGCTGTGTTGATTCCTCATATCAACGCTCGAAGGAAGGCTAAGGTAGAGAGAGTAAGCAATGGCTCAAGTCAGTCAAGTGAGTTCGTTTTGTCATATGTAGATACTTTGTTGGATTTGCAAATGTTGGAGGATGAAGAGGGGAGCAAGCTCGATGATGGCAAAATTTGCACCTTATGTTCGGAGTTTCTGAATGCTGGATCAGATACAACTTCAACTGCGTTGGAGTGGATCATGGCAAATTTGGTGAAATACCATGATATCCAAGAAAGGGTTGTGGAGGAAATTAGAGGGGTCATGGTTGGTAGAGAGGATAGGGAAGTGAAGGAGGAGGATTTGCATAAATTGCCCTATCTCAAGGCTGTGATTTTGGAGGGGTTGAGGCGTCACCCACCATTGCACTTTGTGGCTCCTCATAGGGTAACAAAGGATGTTGTTTTGAATGGTTATTTGGTGCCTACCTATGCCTCTGTGAATTTCTTGGTGGCTGAGATAGGGAGGGACCCAACGGCTTGGGATGACCCCATGGCCTTTAAGCCTGAGAGGTTCATGAACAACGGTGACCAAAATGGAGGCACAACGTTTGACATAATGGGAAGTAAAGAGATCAAGATGATGCCGTTTGGGGCAGGGAGGAGAATGTGTCCTGGCTATGCTTTGGCAATGCTGCACTTGGAGTACTTTGTGGCCAATTTTGTTTCGAATTTTGAGTGGAAGGCCGTGGAAGGAGACGAGGTTGATCTGTCAGAGAAGCTGCAATTCACAACCGTGATGAAGAATCCTTTGAAGGTTCATATATTACCTAGGCAATAG 1542 0.4624 METWLAVTILCLCLSVILKAIRNVLFPLSPLPPGPPKCNFRLLRRYLTDPKTILQKLHVKYGPIFTLHVGYSHTDIFIANRFVAHQALIQHGTIFADRPKANPTNEIISSNQHDILFSFYGPTWRLLRRNLTSRILHPSQVKSYAHARKWVLDNILLQRLKSDSDASNPVRVIDHFQYGMFSLLVLMCLGDKLDEKQIRAIEDSQRHMLVSFARYSVLNFWPPITRILFWKRWKEFLQLRREQEAVLIPHINARRKAKVERVSNGSSQSSEFVLSYVDTLLDLQMLEDEEGSKLDDGKICTLCSEFLNAGSDTTSTALEWIMANLVKYHDIQERVVEEIRGVMVGREDREVKEEDLHKLPYLKAVILEGLRRHPPLHFVAPHRVTKDVVLNGYLVPTYASVNFLVAEIGRDPTAWDDPMAFKPERFMNNGDQNGGTTFDIMGSKEIKMMPFGAGRRMCPGYALAMLHLEYFVANFVSNFEWKAVEGDEVDLSEKLQFTTVMKNPLKVHILPRQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3190 513 Pfam Cytochrome P450 39 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 510 - -
Ssu3g3190 513 PANTHER CYTOCHROME P450 8 510 - -
Ssu3g3190 513 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 SUPERFAMILY Cytochrome P450 32 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Ssu3g3190 513 Gene3D Cytochrome P450 28 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3190 513 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3190 Ssu-Chr3 88045988 88047529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3190 1 513 Cytochrome P450 AT1G64940 53.728 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3190 K24184 - gmx:100816275 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3190 3 88045988 88047529 Ssu3g3190 3 88045988 88047529 ECH