Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3182 ATGCCTTTCCATGAAATTTTCTGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGTTGATCTGTTGGAGATCCATAAGATTTTAAGGTGCAGTTGCTGTAGCAAGAGTGGCAATGCCCTCTTGCCATCCAGGCATGATTCTTCAATTATGTATACTCTGGCTCAAGAGCATGGGGATCTTATCAATCTTCATGACTGGTTCCAgtcttttaaaacaattgttcTTCAACATCAAAATAAACGGAAACAAAAATCAAAGCAGTTCCCCCCaccaaagaagagaaaagatatgAATGGATCTGCTGACCAAAACGAAGCATCAGTTCAAGCACGCTTTTGTAGGGCAGTTACAGAGCTTCAGATCACTGGACTGGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCTCAAAGAGTAGCATTTGGACTTTGA 462 0.381 MPFHEIFCFKNVEKLQLVLIGDPRRRIQVDLLEIHKILRCSCCSKSGNALLPSRHDSSIMYTLAQEHGDLINLHDWFQSFKTIVLQHQNKRKQKSKQFPPPKKRKDMNGSADQNEASVQARFCRAVTELQITGLVRMPSKRRPDFAQRVAFGL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3182 153 Pfam Origin recognition complex winged helix C-terminal 24 151 IPR040855 -
Ssu3g3182 153 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 1 152 - -
Ssu3g3182 153 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 1 152 IPR020795 GO:0003677|GO:0005664|GO:0006260
Ssu3g3182 153 MobiDBLite consensus disorder prediction 88 113 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3182 1 85 Core DNA Replication Machinery Family AT5G16690 70.588 1.51e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3182 K02605 - gmx:100780646 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3182 3 87934530 87938089 Ssu3g3182 3 87934530 87938089 ECH