Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3181 ATGGCACCTTCTCGTAGTGTTGCCGATTCGATGCCTCCGTCAACAACACCCGAAGTCGTAGAGAACGATCTTCAGCCATTCTTTGTTCTTCATAAAGCTTCTTCTCAGAGAAAAGATAGAACATCAACAGGACAGGGAAAATTGTGCAGGAGAAATGAGTTATCTTCATCACCGCAAAGGGCAAAGAAACTGGGAGGAAGTATGACTGAAGAATGTGATCGCCATTTGTTTCAGCAACTGCAGATTGAAGCTTTTGACTTTGTTTGGGCAAAGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAATGCTAGTGTATTTAAGGATATACAACAATGGGTTCTGGAGTGCTTCAATGCTACTAAGTTGCTTGGAGAACCTACTATTGCTGAAGCAACTCGGTCTTTTCCTATTCTAAATAATACTACTCCTGGGAAGCTATTCACTGCGCTAGTTAGTACCAGAAACATAGAGTTCGTTGATGATATATTGACATTTGAAGAGCTTGGCCATTTCTTGAGATCCCATGGATGCCATGTGGCTATGCTTTCATCACTggagttttcattaaaaaatgggATTGCTGGTTGCTTGAAAGCTTTATTGCGAGAGTTTCTAGGGTGTGCTATTGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGTCAACTACAATAAACCTCTGGTGCTGATCATTAATGATTTGGAGAGATGTTGTGGATCAGTCTTAACTGATTTTATCTTGATGTTGAGTGAATGGGTTGTCAAGGTACCAATCATCTTCGTATTTGGAGTTGCAACGACAGTGGATACCCCCGGAAACATTCTGCCATCACATGCTTTTGAGCGTTTGTGCCCTTCTAGGTTTATGCTTGGAACACCAGCTGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACATTGCACCACGTTTAGCATTGGTCATAAAGTGGCAGTCTTCCTGAGAAACTACTTCATCAACCAGGATGGGACAGTAACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCTTATTACATTTCTCAATGGAACCTCTAAGTCTCATACATGGGCGAACACTTGCTGAAGATCAGAAAGAGGGAAAATCTGCACTATCACCTGAGACTCTGTTGAAATACATAGATGAACTTCCATTGTATGCAAGGAATCAAATGGTTGATCATCAGACTAAAAAAAGCATGGCTGAGGGTTTGTCAGAATTGGTGACAGTGCAGAAGCTATGGAGCACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATAGCAGAGTGCGACTATTGGATTTGCTTTGTGAGGCTCTCAATCAAGATTTGTACCTGTCAAGGGATTCTGATTGTCATGTGGGGGACGAAAAAGATCGTGCTTTGTCCTCAAATAATGATCCCTGtcaacaatattccatcatgcAAAGTGGTGGTTTTATTGGCCAGATAGTACGCAAAATGAGGGATCTCCCTACAGGGATGCTATATCAATTGATTGAGAGTTGGGGAAAACTTACTGCAGATTTTTCAGAGATTCAtgagaaattgaaaatgttGCAGTCTTCAGTAAGATGTGAAGACGGCAAGAGTCCACGCAAGAGTTCCAAGGACATTTCCAaGAGATATGCATCCAGGATTTCAGTAAACATTGACAAGGATGCGAGAATGTTAAATTCACAAGCTATCGCATTTTTAGATTGTCTagttagAAATTTTTGA 1743 0.3941 MAPSRSVADSMPPSTTPEVVENDLQPFFVLHKASSQRKDRTSTGQGKLCRRNELSSSPQRAKKLGGSMTEECDRHLFQQLQIEAFDFVWAKIESTIKDVLRDLNASVFKDIQQWVLECFNATKLLGEPTIAEATRSFPILNNTTPGKLFTALVSTRNIEFVDDILTFEELGHFLRSHGCHVAMLSSLEFSLKNGIAGCLKALLREFLGCAIDSADISILASWYREQVNYNKPLVLIINDLERCCGSVLTDFILMLSEWVVKVPIIFVFGVATTVDTPGNILPSHAFERLCPSRFMLGTPAERMDAIVEAVLVKHCTTFSIGHKVAVFLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIHGRTLAEDQKEGKSALSPETLLKYIDELPLYARNQMVDHQTKKSMAEGLSELVTVQKLWSTAVLCLYEAGKYSRVRLLDLLCEALNQDLYLSRDSDCHVGDEKDRALSSNNDPCQQYSIMQSGGFIGQIVRKMRDLPTGMLYQLIESWGKLTADFSEIHEKLKMLQSSVRCEDGKSPRKSSKDISKRYASRISVNIDKDARMLNSQAIAFLDCLVRNF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3181 580 MobiDBLite consensus disorder prediction 1 64 - -
Ssu3g3181 580 MobiDBLite consensus disorder prediction 47 63 - -
Ssu3g3181 580 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 579 IPR020795 GO:0003677|GO:0005664|GO:0006260
Ssu3g3181 580 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 579 - -
Ssu3g3181 580 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 69 361 IPR045667 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3181 1 580 Core DNA Replication Machinery Family AT5G16690 42.784 1.39e-160 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3181 K02605 - gmx:100780646 1009.59