Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3150 ATGAAGGCCACGTCCAACGGGGCGTTCCAACACGAAAATCCTTTGGATTACGCGCTTCCTCTATTAATTCTCCAGATATGTTTGGTTGTGGCCTTTACCAGATTCCTTGCACTCATTTGCAAACCTCTCAAACAACCCAGAGTTATCGCAGAGGTCATTGGAGGAATACTACTTGGACCATCTGCAATTGGGCGGAATGAGAAATTCCTGGACACAATTTTCCCCAAGAGAAGCTTAACTGTGCTTGAAACTGTGGCCAATATTGGTCTTCTATTCTTCTTGTTTCTGGTGGGTCTTGAGCTTGACTTTCGTTCTATACGCAGAACTGGTCACAAGGCCTTAGCCATTGCCTTTGCTGGCATCACATTCCCTTTTGTACTTGGCATTGGCACCTCATATGCTCTTCGAGCCACCGTATCCAAAAATGTTGATCCAACCCCCTTCCTTGTTTTCATGGGTGTTGCTCTCTCGATCACTGCTTTTCCCGTCCTTGCTCGCATCCTAGCTGAGCTCAAACTCCTCACAACTGATATTGGTCGCATAGCAATGTCAGCAGCTGCTGTCAACGATGTTGCAGCATGGATACTACTTGCCCTTGCCATAGCTCTCTCTGGCTCTAACACATCCCCACTTGTTTCTTTATGGGTCATACTTTGTGCTGCTGCTTTTGTCCTCTTTGCTATCTTTGCCATAAGACCCTTGCTTGCAATCATGGCTAAGCGTTCCCATGAGGGTGAACCAGTGCAGGAGATCTACATATGCATCACCTTGACGCTAGTCTTGGCTTGCAGTTTTGTCACCGATGCTATTGGCATTCATGCGCTCTTTGGGGCTTTTGTGGTTGGCATTGTTGTGCCCAAGGACGGTCCCTTTGCTGGTGTGTTGATCGAGAAGATAGAGGACCTTGTAATGAGCCTTTTCTTGCCACTCTATTTTGTGTCCAGTGGTTTGAAGACTAATGTGGCAACTATAAGTGGAGCACTTTCTTGGGGTATGCTAGTGCTTGTTATATTCACTGCTTGCTTTGGAAAGATCATTGGCACATTCCTTGTGTCACTGTTTTGTAAGGTGCCCGTTAGAGAAGCCCTGGCCCTTGGATTTCTCATGAACACCAAGGGCTTGGTGGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTACTGAACGACCAGGCATTTGCAATTTGTGTTTTAATGGCATTGTTCACCACTTTCATCACCACCCCAATAGTGATGGCAGTGTACAAACCAGCTAGAAGGGGATCACCTTACACGCATAAAGCAGTTCAGCGCAATGATCCTGACACAGAGCTACGGGTGTTGGCTTGCTTCCACAGTACCCGCAACATTCCCTCCTTAATCAATCTAATAGAGTCATCCCGGGGAACCAGAAAGCGGGGAAAGCTCTGCGTGTATGCCATGCACTTGATGGAACTCTCAGAGCGACCTTCAGCCATCACAATGGTTCACACGGCACGCAACAATGGCATGCCCTTTTGGAACAAAAAACATGACAATAGAGATCAAATGGTGATTGCATTTCAGGCTTATGGGCATCTAAGTAGTGTCAATGTTCGTCCCATGACAGCCATCTCTGCTTTCGACAATATTCATGAAGACATTTGTACTAGTGCACACCAAAAGCGAGCAGCGATCATCCTCCTCCCATTTCACAAACACCAACGTTTTGATGGGACAATGGAGTCGCTGGGAAACTCATTCAGTGTAATGAATCGGCTTGTGCTTAGCCATGCTCCTTGCTCTGTAGGAATTTTGGTTGATCGTGGCCTTGGAGGGACAAGCCAAGTCCAAGCTAGTGATGTGTCCTACAAGGTTGTGGTGGCCTTCTTTGGAGGACGAGATGACCGTGAAGCACTTGCCTATGGTATGAGAATGGCTGAGCACCCTGGGATTTCACTCAGTGTTGTGAAGTTTGCAGTTCCACCTGGGAAGACATTGGCCTTTGGTGCCAAATTGATTGGTGTAACGGCCAACAAGGACAGGAAGGTAATACAAGTGGCTGATGGCACTACCAATAATGAAGATAAACAAGAGGATGACCAACTTTGGTCTGAGTTCTTAAGTGTATGCTGCAAGAGCGCAGAGTCAATAATGTATGAGGAAAGGATGGTAGAAAGCAAAGAAGATGTTGTAGCTGTATTGAAGGAGAGGAATAAGAGCAATCTAATGTTGGCAGGTAGAATGCCTCAAGTGGCACCATTGGTACACACAAGTGATTGCCCGGAACTTGGTCCTGTTGGAAGCTACTTGGCTTCTTCGGACTTCTCCACTTCTGCATCAGTTATAGTGTTTCAGCAATACAATCCCAAAACAGACGTTTATCCATTGGTTATGGAGGTTTCTGATTACTTGAATATGCCAGACACGCCACCGCATTCTCCATAG 2409 0.4653 MKATSNGAFQHENPLDYALPLLILQICLVVAFTRFLALICKPLKQPRVIAEVIGGILLGPSAIGRNEKFLDTIFPKRSLTVLETVANIGLLFFLFLVGLELDFRSIRRTGHKALAIAFAGITFPFVLGIGTSYALRATVSKNVDPTPFLVFMGVALSITAFPVLARILAELKLLTTDIGRIAMSAAAVNDVAAWILLALAIALSGSNTSPLVSLWVILCAAAFVLFAIFAIRPLLAIMAKRSHEGEPVQEIYICITLTLVLACSFVTDAIGIHALFGAFVVGIVVPKDGPFAGVLIEKIEDLVMSLFLPLYFVSSGLKTNVATISGALSWGMLVLVIFTACFGKIIGTFLVSLFCKVPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGSPYTHKAVQRNDPDTELRVLACFHSTRNIPSLINLIESSRGTRKRGKLCVYAMHLMELSERPSAITMVHTARNNGMPFWNKKHDNRDQMVIAFQAYGHLSSVNVRPMTAISAFDNIHEDICTSAHQKRAAIILLPFHKHQRFDGTMESLGNSFSVMNRLVLSHAPCSVGILVDRGLGGTSQVQASDVSYKVVVAFFGGRDDREALAYGMRMAEHPGISLSVVKFAVPPGKTLAFGAKLIGVTANKDRKVIQVADGTTNNEDKQEDDQLWSEFLSVCCKSAESIMYEERMVESKEDVVAVLKERNKSNLMLAGRMPQVAPLVHTSDCPELGPVGSYLASSDFSTSASVIVFQQYNPKTDVYPLVMEVSDYLNMPDTPPHSP 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3150 802 Gene3D - 21 423 IPR038770 -
Ssu3g3150 802 PANTHER CATION/H+ EXCHANGER 3 1 801 - -
Ssu3g3150 802 Pfam Sodium/hydrogen exchanger family 29 411 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu3g3150 802 PANTHER CATION/H + ANTIPORTER 1 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3150 Ssu-Chr3 87531876 87534638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3150 1 791 Antiporter Super Family AT3G17630 69.406 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3150 - - gmx:100818975 1408.28