Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3149 ATGGAATTGGTAAGCTGTATACTCCTCTTTGCGATAACTTTAGCAACGGTTGCACAAGCTGTGCATTGGGTGGTTTCAAGAGCAGGGCCCAAACTCCCACCAGGACCTTCCCCTGTTCCCATCATTGGAAACCTTCTTGCACTCGGCACAAAGCCTCACAAGTCATTGGCCAATCTTGCTGAGATTCACGGCCCAATCATGACCCTCAAGCTAGGCCAAGTAACCACCATAGTCGTGTCTTCCGCCGACATGGCCAAAGAGGTGCTCCAAACCCACGACCACTCCTTGTCAAACCGTGCCGTTCCACAGGCCGTGCGGGTTCACAACCACCACAACCACAGCATGACCTTCTTGCCCGTTTCACCTCTCTGGCGAGCTATAAGGAAAATATGCAACGGCCAGTTATTCTCCAACAAGACACTCGATGCGAGCCAAGACCTCAGGCGCAACAAACTCCACGAACTCCTCAATGATATCCACCAAAGCAGCCTAGTTGGCGAAGCAGTGGACATTGGAAGACTAGTTTTCAAGACTTCCATCAATCTACTGTCCAACACTATTTTTTCTCTAGATTTGATCCACTCTGCAGGTTCTGCTGGAGATGTCAAGGATTTGGTGGTGAAAATCATGGAAGAGTGTGGGAAACCAAACCTCGCTGACTTCTTCCCTGCACTCAAAATGATTGACCCACAGGACATCAAGAGTCGCAACGCTGTTTATGCTGGCAAGATCATTGACATCTTTCGCCGTTTGGTTGGTCAAAGGTTGAAGCTCAGGGAAGACCAGGGCTTTGACGCAaacaatgacatgctaaataccTTGCTCAACATTGCTCAACTCAACAACCAAGAGATGAACCAAACCAAAATTGAACATTTAGCTCTGACTTTGTTTGTTGCGGGAACGGATACGATTACATCTACGCTAGAATGGGCAATGGCAGAATTGCTCCGAAATGAAAAGGCTATGTCAAAGGCAAAACAAGAGGTGGAGGAAATCATTGGCAAAGGAAAACCCGTTGAGGAATCTGATCTAGCTAGGCTTCCTTATTTACAAGCAGTGATAAAAGAGACCTTCAGATTGCATCCTCCAGTCCCATTTTTGATTCCCCGGAAAGCCAATGCCAATGTGGAAATTGGGGGCTACACAATCCCAAAAGACGCACACGTGCTAGTCAATGTGTGGGCTATTGGCAGAAATACAGGCATTTGGAAGAATGCAAATGTGTTTTCACCCGAGAGGTTCTTGAACTCGGATATTGATGTCAAAGGTCGCAACTATGAGCTTACACCGTTTGGTGCTGGGCGTCGAATTTGTCCTGGCTTGCCATTGGCTATGAGGATGTTGTATTTGATGTTGGGTTCGCTTGTCAACTGTTTCAATTGGAAACTTGAAGATGGTATGAACATGGAAGACAGCTTTGGGATAACATTAGCGAAGACTCAGCCAGTTAGAGTTATTGCTGAGAAAGTATACCAATAA 1482 0.4609 MELVSCILLFAITLATVAQAVHWVVSRAGPKLPPGPSPVPIIGNLLALGTKPHKSLANLAEIHGPIMTLKLGQVTTIVVSSADMAKEVLQTHDHSLSNRAVPQAVRVHNHHNHSMTFLPVSPLWRAIRKICNGQLFSNKTLDASQDLRRNKLHELLNDIHQSSLVGEAVDIGRLVFKTSINLLSNTIFSLDLIHSAGSAGDVKDLVVKIMEECGKPNLADFFPALKMIDPQDIKSRNAVYAGKIIDIFRRLVGQRLKLREDQGFDANNDMLNTLLNIAQLNNQEMNQTKIEHLALTLFVAGTDTITSTLEWAMAELLRNEKAMSKAKQEVEEIIGKGKPVEESDLARLPYLQAVIKETFRLHPPVPFLIPRKANANVEIGGYTIPKDAHVLVNVWAIGRNTGIWKNANVFSPERFLNSDIDVKGRNYELTPFGAGRRICPGLPLAMRMLYLMLGSLVNCFNWKLEDGMNMEDSFGITLAKTQPVRVIAEKVYQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3149 493 SUPERFAMILY Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 Pfam Cytochrome P450 33 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 Gene3D Cytochrome P450 24 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Ssu3g3149 493 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 489 - -
Ssu3g3149 493 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3149 493 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3149 Ssu-Chr3 87520327 87522247 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3149 3 490 Cytochrome P450 AT2G45550 43.775 8.30e-151 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3149 - - gmx:100807166 738.799