Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3145 ATGGAATCAGCAAGTTACTTACTTTTCTTCCTGTTGATGAGCACTATCTCATTGCTTGTGAGGCGCAAACCAAACCACCACAACCTTCCGCCGGGTCCTTCTCCTCTTCCCATCATTGGAAACCTCCTTGAACTAGGCAAAAAGCCACATCAATCCATGGCCAAGCTCGCTATGATTCATGGCCCAATAATGAAGTTAAAACTGGGCCAACTAACCACCATAATCATCTCTTCAGCACAAATGGCCAAAGAGGTGCTTCAAACCCATGATCAATTCTTCTCAAATCGAACCATTCCTCAATCTGTTAAAGTTGTCAACCACGAACACTATAGCCTGGCCTTCCTGCCAGTGTCGCCTCTTTGGCGAAACTTAAGGAAAATATGTAACAATGAATTGTTTGCCCAAAAGACTCTTGATGCGAGCAAAGACCTTAGGCGCAAGATAGTGCAACAACTCCTCAATGATATCCATCACAGCAGCCAAGTCGGTGAGGCAATAAATATTGGCACCGCAGTTTTCAAGACTACCATAAATTTATTGTCCAACACTACATTTTCTGTGGACGTGGTTCACTCAACAAGTACCACGTGCGAGTTCAAGGATTTAGTGACGAATATCACAAAACTTAATGGAGCACCAAACTTGGCAGATTATTTTCCTGCGTTGAAGATGTTTGACCCGCAGAGAATACACAAGCACAATACAGCCAACCACGAGAAGTTGTTAAGCATCGTCGACCGTTTGGTTAACGAACGAATGACGCTGAGGGCTAGCACCGGTTCTGATACCAATAAAGACATGTTGACTGCACTACTCAACATAGCTCAAGAAAATAAGATGATCAACAAAACAGTGATTGAACATTTGCTTATGgTGTCTAGAATGATTAGTGAATAG 897 0.4281 MESASYLLFFLLMSTISLLVRRKPNHHNLPPGPSPLPIIGNLLELGKKPHQSMAKLAMIHGPIMKLKLGQLTTIIISSAQMAKEVLQTHDQFFSNRTIPQSVKVVNHEHYSLAFLPVSPLWRNLRKICNNELFAQKTLDASKDLRRKIVQQLLNDIHHSSQVGEAINIGTAVFKTTINLLSNTTFSVDVVHSTSTTCEFKDLVTNITKLNGAPNLADYFPALKMFDPQRIHKHNTANHEKLLSIVDRLVNERMTLRASTGSDTNKDMLTALLNIAQENKMINKTVIEHLLMVSRMISE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3145 298 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 291 - -
Ssu3g3145 298 SUPERFAMILY Cytochrome P450 26 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3145 298 Gene3D Cytochrome P450 19 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3145 298 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 291 - -
Ssu3g3145 298 Pfam Cytochrome P450 30 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3145 Ssu-Chr3 87474962 87478137 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3145 24 291 Cytochrome P450 AT3G61040 38.376 1.25e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3145 - K23810 gmx:100798291 356.295