Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3136 ATGCCCCCAAGGAATGTCCATGCTGCCAAAGATCTGCTCAATTCATCTGATTATCGTTATCTGGATGTGAGGTCAGTTGAGGAATTCAACAGAAGCCATGTTGAGAATGCTCATAATGTTCCCTATATGTTCATCACAGAAGCAGGACTCGTGAAAAATCCAGACTTTGTTGACCAGGTGGCAGCAATATGCAAGAATGAGGATCATTTAATTGTTGCTTGCAATAGAGGAGGAAGATCACTCCGAGCCTGCGTTGATCTGCTTGATTCAGGATTTAAACGTATTGTTAACATGGGGGGAGGCTACTCTGCGTGGGTGGATGCTGGATTTGCCGGGAACAAGCCAGGAGAAGAGCTCAAAACTAGTTGCAAGTTCCGTCCTAATATCGCACAACCCAGTGACCACTGA 408 0.4559 MPPRNVHAAKDLLNSSDYRYLDVRSVEEFNRSHVENAHNVPYMFITEAGLVKNPDFVDQVAAICKNEDHLIVACNRGGRSLRACVDLLDSGFKRIVNMGGGYSAWVDAGFAGNKPGEELKTSCKFRPNIAQPSDH 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3136 135 CDD RHOD 9 106 - -
Ssu3g3136 135 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 125 - -
Ssu3g3136 135 ProSiteProfiles Rhodanese domain profile. 14 114 IPR001763 -
Ssu3g3136 135 SMART rhod_4 4 111 IPR001763 -
Ssu3g3136 135 Gene3D - 4 111 IPR036873 -
Ssu3g3136 135 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 125 IPR044684 GO:0003824
Ssu3g3136 135 Pfam Rhodanese-like domain 8 107 IPR001763 -
Ssu3g3136 135 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 5 110 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3136 Ssu-Chr3 87345191 87346503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3136 5 118 Sulfurtransferasese or Rhodanese AT5G66170 45.690 2.65e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3136 K22547 - gmx:100794624 244.973