Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3113 ATGGAAGAAGCAACTTGCAGGCTGATTCTCATAACCTCAGTTTTTCTCCTCTTGCTTGTGTATCTTTCGAAATTCATACTAAAGAGAGATGGCAAGAGTAAAATCCTGCCACTTAGTCCACCTGCGTTACCACTCATAGGCCATGTCCATCTCATAAAAGAACCCCTACACCGAAGTCTACACAAGCTCACAGAGAAATATGGCCACACGATATTTCTCCACCTTGGGACACGCAAGGTCCTTGTTGTGTCCTCACCTTCAGCAGTAGAAGAATGCTTCACAAAGAATGATATTACTTTTGCAAACCGCCCCCAAACGCTTGCGGCAAAGCATCTCAATTACAACAGCAAGACGATAGGGTTTGCTTCCTATGGCGACTATTGGCGCAACCTCCGGCGTCTAACCACCGTGGAATTCTTCTCTACCAGTCGCCTTGCCATGTTCACAAGCGTTCGAGAGGAAGAGGTGCAGTTGTTGGTGAAACAACTATTCGAAGAGTGTAGAGGACAAGCAACGTCCAAGGTAGAACTCAGACCAAGACTTGTAGAGTTTTCTTTCAATATGATGCTAAGGATGATATCTGGGAAACGCTACTATGGTAAGCATGCGGTTGCCCTAGAAGGCAAGGAGTTCCAGATTCTCATGAAGGAGTTTGTGGAGCTTACAGGAAGTGGAAATTTGAATGACTTCTTCCCCATACTGCAGTGGGTTGATTTCCAAGGGATTGAAAAGAGGATGGTgaagttgatgaagaagatggacAGCTTCCTTCAGAATCTCCTTGACGAGCACTGCAGAAACAGGGACGTGAGTGGAGGACAGGGGCGAAGGAGTATGACGCTGATTGATGTCATGTTGGACCTACAACAAACGGAGCCAGAATTCTACACCCATGAAACTGTCAAGGGAGTTATCCTGGCAATGCTTATAGCTGGTTCTGAAACTTCAGCCACTACCATGGAATGGgctctttctcttctcctaaATCATCCAGAAGCACTGAATAAGACTAGGGTTGAGATAGACACTTTTGTGGGGCAAGATCAGCTGTTAAACGAGCAAGACATAGCAAAACTCAAATACTTGCAAAACGTAATTACAGAGACACTTCGCCTGTATCCTGTGGCTCCACTCTTGATACCCCACGAGTCCTCCAATGATTGCAATGTTGGTGGTTTTGATATACCACGTGGGACAATGCTACTTGTGAATCTATGGACCCTGCATAGGGACGCTAAGTGGTGGGTAGACCCAACAAGGTTTGAGCCAGAGAGATTCGAGGGAAGGGAAGGTGGTGAAGTAGTGTACAATATGATTCCATTTGGTATTGGAAGGCGAGCTTGCCCAGGAGCTGTTTTGGCAAAACGTGTTATGGAACATGCATTGGGTGCCTTGATTCAGTGTTTTGACTGGGAGAAAATTGGGCACGAAGAAATTGACATGACAGAGGGAATAGCTATTACGATGCCTAAACTTGAACCTTTGGTTGCCTTATGCAAACCACGTCAAGGTATGATAAAGGTTCTGTCAAATATGTAA 1539 0.4431 MEEATCRLILITSVFLLLLVYLSKFILKRDGKSKILPLSPPALPLIGHVHLIKEPLHRSLHKLTEKYGHTIFLHLGTRKVLVVSSPSAVEECFTKNDITFANRPQTLAAKHLNYNSKTIGFASYGDYWRNLRRLTTVEFFSTSRLAMFTSVREEEVQLLVKQLFEECRGQATSKVELRPRLVEFSFNMMLRMISGKRYYGKHAVALEGKEFQILMKEFVELTGSGNLNDFFPILQWVDFQGIEKRMVKLMKKMDSFLQNLLDEHCRNRDVSGGQGRRSMTLIDVMLDLQQTEPEFYTHETVKGVILAMLIAGSETSATTMEWALSLLLNHPEALNKTRVEIDTFVGQDQLLNEQDIAKLKYLQNVITETLRLYPVAPLLIPHESSNDCNVGGFDIPRGTMLLVNLWTLHRDAKWWVDPTRFEPERFEGREGGEVVYNMIPFGIGRRACPGAVLAKRVMEHALGALIQCFDWEKIGHEEIDMTEGIAITMPKLEPLVALCKPRQGMIKVLSNM 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3113 512 Gene3D Cytochrome P450 27 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Ssu3g3113 512 PANTHER CYTOCHROME P450 82C3-RELATED 7 511 - -
Ssu3g3113 512 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 Pfam Cytochrome P450 37 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 511 - -
Ssu3g3113 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3113 512 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3113 Ssu-Chr3 87049193 87052997 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3113 12 510 Cytochrome P450 AT4G37340 48.317 1.12e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3113 - - gmx:100794610 785.793