Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu3g3047 | ATGGCGAACGCCGGTCCCGGAACCAACGGATCTCAGTTCTTCATCTGCACGACGAAGACGGAGTGGCTCGACGGGAAACACGTGGTGTTCGGACAGGTCGTCGAGGGATTGAATGTGGTCAAGCAGATCGAGACGGTCGGCTCCAGCTCCGGCAAGACCTCCAGGCCCGTCGTCGTTGCCGACTGCGGTCAACTCTCTTAG | 201 | 0.602 | MANAGPGTNGSQFFICTTKTEWLDGKHVVFGQVVEGLNVVKQIETVGSSSGKTSRPVVVADCGQLS | 66 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu3g3047 | 66 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 1 | 63 | IPR002130 | GO:0000413|GO:0003755 | |
Ssu3g3047 | 66 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 64 | IPR002130 | GO:0000413|GO:0003755 | |
Ssu3g3047 | 66 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 12 | 24 | IPR002130 | GO:0000413|GO:0003755 | |
Ssu3g3047 | 66 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 25 | 40 | IPR002130 | GO:0000413|GO:0003755 | |
Ssu3g3047 | 66 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 66 | - | - | |
Ssu3g3047 | 66 | Gene3D | - | 1 | 66 | IPR029000 | - | |
Ssu3g3047 | 66 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 66 | - | - | |
Ssu3g3047 | 66 | SUPERFAMILY | Cyclophilin-like | 1 | 65 | IPR029000 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu3g3047 | Ssu-Chr3 | 85949346 | 85949546 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu3g3047 | 1 | 46 | U-box Gene Family | AT5G67530 | 52.174 | 4.66e-09 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu3g3047 | K01802 | - | gmx:106795232 | 127.487 |