Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3035 ATGCAACCTTTCACATCATCACCACCTTTCTATACTGAGCTCCTTCCTTCACTGCTCTTCTGTTCTTCGCTTCTTGTGGCTCTTTTTATCCATTGGCTATTATACCACAAAATCAAACGCTTGCCCCCTGGTTCCATGGGCTGGCCCTACCTAGGAGAGACCCACAAGCTCTACACTCAAAACCCAAATACCTTCTTCTCCAACAGGCTGAAAAGGTATGGAGGTATCTTCAAAACTCACATACTGGGTTATCCTTGTGTGATGATTTCAAGCCCAGAGGCAATGAGAAGTGTGCTTGTGACACAAGCACATCTGTTCAAGCCAACATACCCTGCAAGCAAAGAGAAGATGATAGGGCCAGAGGCTGTTTTCTTTCAGCAAGGTGACTATCACTCCATGCTCAAAAAGTTGGTCCAGATCACGTTTTTGCCCTCTGCAATTAAAAACTCAGTGTTGGAGGTTGAGCACGTTGTGCTTAAACTGCTGCCAACTTGGgccaacacaaccatcaatgCCTTACAAGAAATGAAGAGGTATGCTTTCGAGGTAGCTGCCATCTCGGCCTTCGGTGAAATAATGAAGCTTGAAATGGAAGAAATCAAAGACCTGTATCGGTGCTTGGAGAAGGGCTACAATTCCTTTCCTTTGTATGTTCCTGGAACTTCCTATTGGAAATCATTGAAGGCAAGGAAAGTTCTGAATGAAACTATAAGGAGATTAATacataaaagaagagaaagcaaGAACTATGGAGGAGGGTTGTTGGGAGTTTTGTTGCGAGCTAGAGGTCACAAAATATATGAACTTAATGATTCTCAGATTGCTGATAACCTCATAGGCGTGATCTTTGCTGCACATGATACCACGGCCAGTGCTCTAACATGGGTTCTGAAGTACTTGCATGACAATGTCAACCTCTTGGAAGCTGTGACGGAAGAGCATGAAAGAATTAAAAGCAAACTAGCTATTGAAAATCGTGGGCTCACATGGGATGATACCAAGCAGATGCCACTATCTGGCCGGGTTTTCCAAGAAACTCTGAGAAGTGCTAGCATATTGTCATTCACATTCAGAGAAGCTGTACAAGATGTTGAGCTCGAAGGTTACTCTATTCCAAAAGGTTGGAAGGTCCTTCCCCTCTTCAGAAGCATTCATCACTCTGCCGATTTCTTCCCTCAACCAGAAACTTTTGATCCTTCGAGATTCGAGGCGCCACCAAGACCTAACACATACATGCCATTTGGAAATGGAGTCCACTCTTGTCCAGGCAGTGAGCTGGCTAAGCTTGAGTTTCTCGTCCTCCTCCACCACTTCACTGTTGCTTATAGGTGGCAAGTTGTGGGAAATGAAGATGGAATACAGTATGGTCCTTTTCCTGTACCCAAACATGGACTGCCACTCAAGATAAGCCCAAGGAACAAAATACTTACCGAAGTTGCAAATTTCAGACTTTAG 1455 0.4316 MQPFTSSPPFYTELLPSLLFCSSLLVALFIHWLLYHKIKRLPPGSMGWPYLGETHKLYTQNPNTFFSNRLKRYGGIFKTHILGYPCVMISSPEAMRSVLVTQAHLFKPTYPASKEKMIGPEAVFFQQGDYHSMLKKLVQITFLPSAIKNSVLEVEHVVLKLLPTWANTTINALQEMKRYAFEVAAISAFGEIMKLEMEEIKDLYRCLEKGYNSFPLYVPGTSYWKSLKARKVLNETIRRLIHKRRESKNYGGGLLGVLLRARGHKIYELNDSQIADNLIGVIFAAHDTTASALTWVLKYLHDNVNLLEAVTEEHERIKSKLAIENRGLTWDDTKQMPLSGRVFQETLRSASILSFTFREAVQDVELEGYSIPKGWKVLPLFRSIHHSADFFPQPETFDPSRFEAPPRPNTYMPFGNGVHSCPGSELAKLEFLVLLHHFTVAYRWQVVGNEDGIQYGPFPVPKHGLPLKISPRNKILTEVANFRL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3035 484 Gene3D Cytochrome P450 35 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Ssu3g3035 484 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 18 470 - -
Ssu3g3035 484 Pfam Cytochrome P450 42 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3035 484 PANTHER CYTOCHROME P450 26 18 470 - -
Ssu3g3035 484 SUPERFAMILY Cytochrome P450 32 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3035 Ssu-Chr3 85842021 85846042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3035 14 466 Cytochrome P450 AT3G19270 56.167 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3035 K09843 - gmx:100782541 758.829