Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3031 ATGACCAACACCAACCCACAGTATTACCCTTCAAACATACACCAAGCCATGCATTCCCACATTCCCTATCATTCCAACACCATGACCAAACCAAGAACCCTCAATCTCACCTTCCTCCTGCAAGACATCCAAATTTTGGAGATTTTCATTGCAGTTCTTGTCTTCATACTCATTCATTCTCTTAGGCAAAAGAAACATCATGGCCTAGTTACTTGGCCTGTCCTTGGAATGCTTCCTTCTTTGGTGACAGGACTCAGAGCCAACATATATGAATGGATCACAGACGTGCTCAACAGACAAAACGGGACGTTCAGATTCAAAGGGCCATGGTTTAGCAGCCTCAACTGCATTGTCACCTCCGATCCTCGCAATCTCGAGCACCTTCTCAAAACCAATTTCCCTCTCTTCCCTAAAGGAGGGTACTTCAGAAACACAGTTAGAGACCTACTAGGAGATGGTATATTCAATGCAGACGACGACACATGGCAGAAGCAAAGGAAAACAGCAAGCATTGAGTTTCATTCAACCAAGTTCAGACAATTAACAACAGAATCCTTGTTCGAGCTTGTCCACTGTAGGCTCTTGCCCGTGTTAGAGGCATCGGTTAAGAAATCTGTTTCCATAGACCTCCAAGACATTCTCTTAAGGCTAACATTTGATAATGTTTGCATGATAGCCTTTGGTGTTGATCCAGGTTGTTTGCGCTTGGGTTTGCCTGAGATACCATTTGCCAAAGCCTTTGAGGATGCAACAGAAGCCACAGTATTTCGTTTTGTTACCCCCACGTGTGTTTGGAAGGCCATGAGGTTTCTCAACCTGGGGGTGGAAAGGAAGCTGAAGAAGTCCATAAAAGGGGTTGATGAGTTTGCTGAGAATGTCATTCGGACTAGAAAGAAGGAACTCTCTTTGGAATGTGAAGACACGAGGCAGAGATCTGACTTGTTAACTGTGTTTATGAGGCTGAAGGATGAGAATGGACAAGCTTATTCGGATAAGTTTTTGAGGGATATATGTGTGAACTTTATATTGGCAGGGAGGGACACTTCTTCGGTTGCTTTGAGTTGGTTTTTCTGGTTGCTTGAACAGAATCCTGAAGTGGAGGAGAATATTCTAGCAGAGATATGCAGGGTGGTGAGTCAAAGGAAAGACATAAAGAGGGAAGAGTTTGATAATTCTTTGAGATTTGGGCCGGAGGAGATAAAAAAGATGGATTATTTGCATGCTGCTTTATCAGAAGCTCTGAGGTTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTAGTTGAAGATGATACATTCCCAGATGGAACGGTACTAAAGAAAGGGACGAAAGTGATCTATGCAATCTATGCAATGGGAAGAATGGAAGGCATATGGGGGAAGGACTGCAAGGAGTTCAGGCCAGAAAGATGGTTAAGAGATGGGAGGTTCATGAGTGAGTCTGCCTACAAATTCACTGCTTTCAATGGTGGACCTCGCTTGTGCTTAGGCAAAGATTTTGCATACTATCAGATGAAATATGCTGCGGCCAGCATCATATACCGCTACCGTGTGAAGGTGGTGGAGAACCACCCTGTGGTGCCAAAGCTTGCCTTAACTATGTACATGAAGCATGGATTGAAAGTTAACCTCTACCGGAGGGATGCTGcacaaattcaaaaacaattggAGGATTGGTTTAAATGA 1686 0.4365 MTNTNPQYYPSNIHQAMHSHIPYHSNTMTKPRTLNLTFLLQDIQILEIFIAVLVFILIHSLRQKKHHGLVTWPVLGMLPSLVTGLRANIYEWITDVLNRQNGTFRFKGPWFSSLNCIVTSDPRNLEHLLKTNFPLFPKGGYFRNTVRDLLGDGIFNADDDTWQKQRKTASIEFHSTKFRQLTTESLFELVHCRLLPVLEASVKKSVSIDLQDILLRLTFDNVCMIAFGVDPGCLRLGLPEIPFAKAFEDATEATVFRFVTPTCVWKAMRFLNLGVERKLKKSIKGVDEFAENVIRTRKKELSLECEDTRQRSDLLTVFMRLKDENGQAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLEQNPEVEENILAEICRVVSQRKDIKREEFDNSLRFGPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDTFPDGTVLKKGTKVIYAIYAMGRMEGIWGKDCKEFRPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVENHPVVPKLALTMYMKHGLKVNLYRRDAAQIQKQLEDWFK 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3031 561 PANTHER CYTOCHROME P450 31 550 - -
Ssu3g3031 561 Pfam Cytochrome P450 71 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS E-class P450 group I signature 495 518 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS E-class P450 group I signature 407 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS E-class P450 group I signature 485 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 SUPERFAMILY Cytochrome P450 68 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 488 497 IPR017972 GO:0005506|GO:0016705
Ssu3g3031 561 PANTHER BNAC02G41740D PROTEIN 31 550 - -
Ssu3g3031 561 Gene3D Cytochrome P450 63 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS P450 superfamily signature 486 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g3031 561 PRINTS P450 superfamily signature 495 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3031 Ssu-Chr3 85787992 85790603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3031 38 554 Cytochrome P450 AT5G23190 77.027 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3031 K15402 - gmx:100809503 1047.73