Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2981 ATGTCAAGTTTGAGAGACACTGCAATCAATCTCCTGGCAGCAGGAAGGGACACAATCAGTGCAGGTCTCAGCTGGTTGTTCTGGCTTGTTTCAATACATCCTCTTGTGGAAGCTAAAATTCTTGAAGAAATCAGAGATAACTTTAAAACCAACGAAGAAAATTGGCTAGCTTCTGGTGTGAAAGGGCTTGATAAGCTAGTTTACCTGCATGGAGCTATATGTGAAGGTTTGAGGCTTTTTCCTCCAGTGCCTTTCGAGCACGAGTGTGCCATAAAATCTGATATACTTCCTAGTGGTGATCGTATTAATCCAAATACGATGGTATATTACTCTCTATACTCAATGGGAAGGATGGAACAAACATGGGGAAAAGACTGCTTGGAATTTAGGTAG 393 0.4148 MSSLRDTAINLLAAGRDTISAGLSWLFWLVSIHPLVEAKILEEIRDNFKTNEENWLASGVKGLDKLVYLHGAICEGLRLFPPVPFEHECAIKSDILPSGDRINPNTMVYYSLYSMGRMEQTWGKDCLEFR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2981 130 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 130 - -
Ssu3g2981 130 PANTHER CYTOCHROME P450 4 130 - -
Ssu3g2981 130 Pfam Cytochrome P450 3 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2981 130 Gene3D Cytochrome P450 1 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2981 130 SUPERFAMILY Cytochrome P450 3 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2981 Ssu-Chr3 84934414 84934806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2981 4 130 Cytochrome P450 AT2G23180 45.669 7.63e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2981 - - ahf:112735737 225.713