Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2952 ATGGAAAATTCCCTGGATCCAAACATAGTGAAGGGTAAGATTGTGGTCTGTGACAGAGGGAGTAGCCCTAGGGTTGCGAAGGGGTTGGTGGTGAAGAAAGCCGGCGGAGTGGGAATGATTCTGGCGAACGGAATCTCCAACGGCGAGGGACTCGTCGGAGACGCTCATCTTCTTCCGGCATGTGCAGTTGGCGCCAACGAAGGAGATGCTATCAAGAAATACATCTCCTCTTCAGCGAACCCAACGGCCACGCTTGATTTCAAAGGAACTATTCTGGGAATCAAACCGGCACCGGTTGTTGCTTCGTTCTCTGCCAGAGGACCGAACGGTTTAAACCCTCAGATACTTAAACCGGATTTGATTGCTCCCGGTGTGAACATCCTCGCTGCTTGGACTGACGCTGTCGGCCCGACCGGTCTGGATTCTGATACGAGGAGAACCGAATTCAACATCCTGTCTGGTACTTCCATGGCTTGCCCTCACGTGAGTGGCGCCGCGGCTTTGCTCAAATCCGCGCACCCCGATTGGAGCCCCGCCGCCGTAAGGTCCGCCATGATGACCACCGCCACCGTCCTCGATAACCGTAACCAGCCAATGATCGACGAAGCCACCGGGAACAGTTCCGCCCCTTACGATTTCGGCGCTGGCCATCTTAACCTCGGACGAGCAATGGATCCTGGGTTGGTGTACGATATTACCAACAATGATTACGTGAATTTCCTTTGCGGTATCGGTTACGGGCCCAAGGTTATTCAGGTGATCACTCGCTCGCCGGAGAGTTGTCCGGCGAGGAGGCCGTCCCCGGAGAATCTGAATTACCCGTCCTTCGTTGCTATGTTTCCGGTTTCGTCCAAGGGGGTGGCGTCGAAGACGTTCATACGGACCGCGACCAACGTGGGGCCCGCGAACTCGGTTTACCGTGTCAGCGTGGAGGCGCCGGCGAGTGGGGTGACCGTGACGGTGAAGCCGTCGCGGCTGGTGTTCTCGGAGGCGGTGAAGAAGCGGAGCTATGTGGTGACGGTGGCGGCGGATACCCGGAATCTGAAGCTGGGTCAGTCCGGGGCGGTGTTCGGGTCGCTGTCGTGGACGGATGGGAACCACGTGGTTCGGAGCCCCGTTGTCGTTACTCAAATAGAACCGTTATAG 1146 0.5716 MENSLDPNIVKGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGANEGDAIKKYISSSANPTATLDFKGTILGIKPAPVVASFSARGPNGLNPQILKPDLIAPGVNILAAWTDAVGPTGLDSDTRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAVRSAMMTTATVLDNRNQPMIDEATGNSSAPYDFGAGHLNLGRAMDPGLVYDITNNDYVNFLCGIGYGPKVIQVITRSPESCPARRPSPENLNYPSFVAMFPVSSKGVASKTFIRTATNVGPANSVYRVSVEAPASGVTVTVKPSRLVFSEAVKKRSYVVTVAADTRNLKLGQSGAVFGSLSWTDGNHVVRSPVVVTQIEPL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2952 381 SUPERFAMILY Subtilisin-like 97 282 IPR036852 GO:0004252|GO:0006508
Ssu3g2952 381 ProSiteProfiles Serine proteases, subtilase domain profile. 1 224 - -
Ssu3g2952 381 Gene3D Peptidase S8/S53 domain 93 237 IPR036852 GO:0004252|GO:0006508
Ssu3g2952 381 Pfam Subtilase family 93 205 IPR000209 GO:0006508|GO:0008236
Ssu3g2952 381 ProSitePatterns Serine proteases, subtilase family, serine active site. 154 164 IPR023828 -
Ssu3g2952 381 PANTHER XYLEM SERINE PROTEINASE 1 2 375 - -
Ssu3g2952 381 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 375 IPR045051 -
Ssu3g2952 381 SUPERFAMILY PA domain 10 77 IPR046450 -
Ssu3g2952 381 Pfam Fibronectin type-III domain 270 375 IPR041469 -
Ssu3g2952 381 CDD PA_subtilisin_like 1 85 - -
Ssu3g2952 381 Gene3D - 2 92 - -
Ssu3g2952 381 Pfam PA domain 9 71 IPR003137 -
Ssu3g2952 381 Gene3D - 241 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2952 Ssu-Chr3 84574703 84575848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2952 1 381 Subtilisin-like Serine Gene Family AT4G34980 75.457 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2952 - - gmx:100817537 708.368