Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2948 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGACCTTCTGGCGATGCAGGCGTGCAACCTGTTCTGCCTCCCTGAGAACTACCAGATGAAGTATTACCTCTATCACATCCTCTCCTGGCCCCAGCTTCTCTACGTCGCCGAAGACTACAACGGCCGCATCGTCGGCTACGTCCTCGCCAAAATGGAGGAAGAGACCACCGACTGCCACGGCCACATCACCTCTCTCGCCGTCCTCCGCACCCACCGCAAACTCGGCCTCGCCACAAAACTCATGACTGCTGCCCAGAACGCCATGGAACAGGCCCGTCCACCGATAAatatctttcaatatataaattatattttggatttacaaaTTCCTTTATGctctcttattttgtttgttatctCGGTTACCAGTTTGTTAGGTCTTACATTGCATTGGCTGTGGGTTTCTCTGACGCAGGTGTTTGGTGCGGAGTACGTGTCACTGCACGTGCGGAAGAGCAACCGCGCGGCGTTTAATTTGTACACGGAGACCTTGGGGTATAAGATTCATGATGTGGAGGCTAAGTATTATGCGGATGGGGAGGATGCTTACGACATGAGGAAGCAGCTCGAAGGGAAGCagcaccatcatcatcatcaccatcaccaccaccatcatcaccaccaccaccatcatgagCACGGTGGTGGGTGTTGTTCCGGGGAGGCCAAGGGGAGCGTGAAAGCCGCCTGA 720 0.4681 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQARPPINIFQYINYILDLQIPLCSLILFVISVTSLLGLTLHWLWVSLTQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLEGKQHHHHHHHHHHHHHHHHHHEHGGGCCSGEAKGSVKAA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2948 239 MobiDBLite consensus disorder prediction 200 239 - -
Ssu3g2948 239 Gene3D - 2 231 - -
Ssu3g2948 239 PANTHER N-TERMINAL ACETYLTRANSFERASE 145 234 IPR045047 GO:0004596|GO:0006474|GO:0031415
Ssu3g2948 239 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 101 IPR045047 GO:0004596|GO:0006474|GO:0031415
Ssu3g2948 239 Pfam Acetyltransferase (GNAT) family 39 99 IPR000182 GO:0016407
Ssu3g2948 239 PANTHER ACYL-COA N-ACYLTRANSFERASE-RELATED 145 234 - -
Ssu3g2948 239 PANTHER ACYL-COA N-ACYLTRANSFERASE-RELATED 1 101 - -
Ssu3g2948 239 MobiDBLite consensus disorder prediction 201 223 - -
Ssu3g2948 239 CDD NAT_SF 43 102 - -
Ssu3g2948 239 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 200 IPR000182 GO:0016407
Ssu3g2948 239 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 186 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu3g2948 Acetyltransf_1 8e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2948 K20791 - gmx:100810038 314.694