Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu3g2926 | ATGAAAACTGGTAACAGATTTGTTGGGATAGCTCATGCCAAGCAGAAACTCCAGAGAACTCTTTCACAAAGAATCAAAATGGCTTCAGCCATTGCTGATGTTCCAAAAGGCCACTTGGCAGTCTATGTTGGAGAGAACTATAAGAGGTTTGTAATTCCAATATCTTACCTAAGCCATCCTTTATTCAGAGACTTGTTGGATTGGGCTGAAGAAGAATTCGGATTCAATCACCCAATGGGTGGTCTCACTATTCCATGTACTGAAGATTACTTCATTAGTCTAACTACttctcttaattaa | 300 | 0.3833 | MKTGNRFVGIAHAKQKLQRTLSQRIKMASAIADVPKGHLAVYVGENYKRFVIPISYLSHPLFRDLLDWAEEEFGFNHPMGGLTIPCTEDYFISLTTSLN | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu3g2926 | 99 | Pfam | Auxin responsive protein | 23 | 97 | IPR003676 | GO:0009733 | |
| Ssu3g2926 | 99 | PANTHER | SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY | 10 | 98 | - | - | |
| Ssu3g2926 | 99 | PANTHER | SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED | 10 | 98 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu3g2926 | Ssu-Chr3 | 84236890 | 84237189 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu3g2926 | 33 | 91 | Calmodulin-binding Proteins | AT5G20810 | 64.407 | 1.10e-20 | 80.1 |