Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2898 ATGGCTCTCGCTTGGAATTTAGTCATCATTCTGATTCTTCTTGTTCTGCAACAATCTTATTTCCGTGTCACCTTTGGCTCAAGCAATGTCCATATTGTGTATATGGGTGAAAGAATGAACCAGAGTGAGCAACAGTTAGTTGAAGACTCCCACGTTGACATACTATCACGTATTCTCGGAAGcAAAAGCGCTGCTAGGAAGTCCATCCTGTATAGCTATAAGCATGGCTTTTCTGGATTCGCTGCAGTTTTAAGTCACTCTCAAGCTAAGCTCATTGCAGATTTTCCGGGGGTTGTCCGTGTGATTCCAAATCAAATTCTTAGTCTTCACACAACAAGAAGTTGGGACTTCTTGCACGTAAAGCAAGATATAGTAACCGGTGCTCTTTCTGGGGGTCAATCTGGAAGAGGCACCATCATCGGCATCATGGATACTGGTATTTGGCCAGAGTCTGAGAGCTTTAGAGATGAGCACATGGACAATCCTCCTCTTCACTGGCGTGGTATATGCCAAGGAGGAGAAAACTTTGACCGCTCCCATTGTAATAGGAAAATTATTGGTGCACGTTGGTATATTAAAGGATATGAAGCTGAAATTGGTAAACTAAATACAAGCGATGGGGTAGAGTACTTATCTCCTCGAGATGCATCAGGCCATGGCACTCACACGTCATCTACTGCAGCTGGCGTTGCAGTAGAAAATGCAAGTTTTATGGGACTAGCTAAAGGATTGGCTAGAGGTGGTGCTCCATCAGCTTGGTTAGCTATCTACAAAATTTGTTGGTCTACAGGGGGATGCAGCTCCGCTGACCTTCTTGCAGCATTTGATGATGCAATATTTGATGGGGTTGATATTCTTTCAGCATCTCTTGGCTCAGCTCCTCCACTTCCTATTTATGTTGAGGATGCACTGGCCATTGGTTCTTTCCATGCTGTAGCTAAAGGAATTTCTGTGGTATGCTCTGGTGGCAATTCTGGCCCATATCCCCAAACCGTCATAAATACTGCCCCTTGGATTATTACCGTTGCTGCTAGTACCATCGATAGAGAATTTCCATCTAGGATTATCCTGGGAAACAATCAAACTCTACAGGGTCAGAGTTTATATACAGGGAAAGGTTTGAGCAAGTTTTATCCTATTGTGTTTGGAGAAGACATAGCAGCTTCGGATGCAGATGAAGAAAGCGCAAGGAGCTGCAATTCAGGGAGCCTGAATGCCACCTTAGCAAAAGGAAAAGCAATTCTGTGTTTCCAGTCTCGGTCACAGAGGTCAGCCACAGTTGCTATAAGAACTGTAACGGAAGTTGAGGGCGCTGGTCTCATATTTGCTCAGTTTCCTACTAAAGGTGTTGATACATCATGGAGTAAACCTGGTGTCCAAGTTGACTATATTACGGGAACAACTATTCTATCATACATGGAAGCAACTAGgaATCCTGTAATAAAGTTTGGCAAGACAAAAACAGTTGTGGGGCAACAGATATCACCGGAAGTGGCATTCTTCTCATCGCGAGGACCAAGTTCTTTGTCTCCTTCAGTGTTGAAGCCTGACATTGCTGCTCCTGGGGTTAATATTCTGGCGGCCTGGTCACCTGCTTCTTCTGCCCGTTTGCTATCTGATGCAAATGAAGATGAGTTACATGATCCCCTTAACTTCAACATTGAGTCAGGAACTTCCATGGCATGCCCCCACATATCTGCTATCGTTGCACTTGTAAAGACTGCACATCCAAGTTGGAGCCCCGCTGCAATTAAGTCTGCCATTGTCACAACAGCTTCTCTGAAAAATGAATACAAACAATATATTGGGGCTGAGGGAGCACCACATAAACAAGCTGACCCATTTGACTATGGCGGTGGTCATGTTGATCCTAACAAAGTGACAGATCCTGGTCTCGTATATGACTTGAAAAACTCAGACTACTTTCATTTCCTCTGTTCTATGGGCTACAATGACACTGCCATAAGCTTATTGACAGGGTTTCCTTCCAAATGCCATAAATCACCCAAGTTTCTGCTAAACATGAACCTGCCTTCTATTATTATTCCCGAACTGAAGCAGCCCCTGACGGTAACAAGAACAGTCACTAATGTTGGCCCAATTAAGTCTATCTACACTGCTCGTGTTGTAGCTCCAATTGGCATATCAGTTGCAGTTGAGCCACCAACCTTAACATTTAGTtctaaaggaaagaaaatgaaattcaagGTAACTTTTTCTTCGAAGCTACGAGTTCAAAGTGGATTTTCGTTTGGGTACCTGTTCTGGGAAGATGGGTCGCATGAAGTCAGGATACCATTGGCAGTCCGCTCTGTAGTAGATGAATTTTGTGTACAAACATAA 2343 0.4341 MALAWNLVIILILLVLQQSYFRVTFGSSNVHIVYMGERMNQSEQQLVEDSHVDILSRILGSKSAARKSILYSYKHGFSGFAAVLSHSQAKLIADFPGVVRVIPNQILSLHTTRSWDFLHVKQDIVTGALSGGQSGRGTIIGIMDTGIWPESESFRDEHMDNPPLHWRGICQGGENFDRSHCNRKIIGARWYIKGYEAEIGKLNTSDGVEYLSPRDASGHGTHTSSTAAGVAVENASFMGLAKGLARGGAPSAWLAIYKICWSTGGCSSADLLAAFDDAIFDGVDILSASLGSAPPLPIYVEDALAIGSFHAVAKGISVVCSGGNSGPYPQTVINTAPWIITVAASTIDREFPSRIILGNNQTLQGQSLYTGKGLSKFYPIVFGEDIAASDADEESARSCNSGSLNATLAKGKAILCFQSRSQRSATVAIRTVTEVEGAGLIFAQFPTKGVDTSWSKPGVQVDYITGTTILSYMEATRNPVIKFGKTKTVVGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILAAWSPASSARLLSDANEDELHDPLNFNIESGTSMACPHISAIVALVKTAHPSWSPAAIKSAIVTTASLKNEYKQYIGAEGAPHKQADPFDYGGGHVDPNKVTDPGLVYDLKNSDYFHFLCSMGYNDTAISLLTGFPSKCHKSPKFLLNMNLPSIIIPELKQPLTVTRTVTNVGPIKSIYTARVVAPIGISVAVEPPTLTFSSKGKKMKFKVTFSSKLRVQSGFSFGYLFWEDGSHEVRIPLAVRSVVDEFCVQT 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2898 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 769 IPR045051 -
Ssu3g2898 780 CDD Peptidases_S8_3 109 593 IPR034197 -
Ssu3g2898 780 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Ssu3g2898 780 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Ssu3g2898 780 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Ssu3g2898 780 SUPERFAMILY Subtilisin-like 109 632 IPR036852 GO:0004252|GO:0006508
Ssu3g2898 780 CDD PA_subtilisin_like 355 482 - -
Ssu3g2898 780 Gene3D - 645 773 - -
Ssu3g2898 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Ssu3g2898 780 PANTHER OS09G0530800 PROTEIN 40 769 - -
Ssu3g2898 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 110 IPR037045 -
Ssu3g2898 780 Pfam Fibronectin type-III domain 674 769 IPR041469 -
Ssu3g2898 780 ProSiteProfiles Serine proteases, subtilase domain profile. 114 628 - -
Ssu3g2898 780 Pfam Subtilase family 135 596 IPR000209 GO:0006508|GO:0008236
Ssu3g2898 780 Gene3D Peptidase S8/S53 domain 137 641 IPR036852 GO:0004252|GO:0006508
Ssu3g2898 780 Gene3D - 348 490 - -
Ssu3g2898 780 Pfam Peptidase inhibitor I9 30 110 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2898 Ssu-Chr3 83813356 83821583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2898 28 773 Subtilisin-like Serine Gene Family AT1G32960 47.299 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2898 - - gmx:100775442 1375.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2898 3 83813356 83821583 Ssu3g2898 3 83813356 83821583 ECH