Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2866 atgaAGGACGCAGATGTGTCAAGGCAGATCCAGCAGATGATTAGGTTCATCCGCCAAGAGGCTGAGGAGAAAGCTAATGAAATATCTGTTGCAGCTGAGGAGGAATTCAATATTGAGAAACTGCAATTACTTGAAGCTGAAAAAAGAAAGATCAGGCAAGAGTACGAACGAAAAGCCAAACAAATTGACGTCCGTAGAAAGATTGAATACTCAACGCAGCTAAATGCATCCCGAATAAAAGTGCTTCAAGCGCAAGATGATGCGGTGAGTTCTATAAAGGAAGCTGCTAAAAAGGGGCTTTTAAGTGTCTCAAGTGATAAGAAAGTATACAGGAAACTCGTCAAAGACATGATTGTTCAGTGTTTACTACGCTTGAGGGAACCATCTGTGCTATTAAGATGCAGAGAGGGTGACCGTAAGCTAATTGAATCATTGATAGAGGAAGCCAAAAAAGAATACTCAGAGAAAGCCAATATGCAAGCCCCTAAGATTACCCTTGATGATCGTGTTTACCTCCCACCACCGCCTAAGAACGACGCCGTGGATTCCCATGAACCTTTTTGCTCCGGAGGAGTAGTGTTGGCCTCGGAGGACGGGAAGATTGTGTTGGAGAACACCCTTGATGCGCGCCTGGATGTCATTTTTCGGCAGAAACTGCCTGAGATAAGGAAGCGCCTATTAGGTTGA 687 0.4425 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQIDVRRKIEYSTQLNASRIKVLQAQDDAVSSIKEAAKKGLLSVSSDKKVYRKLVKDMIVQCLLRLREPSVLLRCREGDRKLIESLIEEAKKEYSEKANMQAPKITLDDRVYLPPPPKNDAVDSHEPFCSGGVVLASEDGKIVLENTLDARLDVIFRQKLPEIRKRLLG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2866 228 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Ssu3g2866 228 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 1 228 - -
Ssu3g2866 228 Coils Coil 38 61 - -
Ssu3g2866 228 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Ssu3g2866 228 Gene3D - 91 228 IPR038495 -
Ssu3g2866 228 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Ssu3g2866 228 Coils Coil 14 34 - -
Ssu3g2866 228 Gene3D - 1 62 - -
Ssu3g2866 228 SUPERFAMILY V-type ATPase subunit E-like 87 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2866 Ssu-Chr3 83450540 83452126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2866 1 228 Primary Pumps ATPases(2) AT3G08560 70.175 7.03e-115 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2866 K02150 - gmx:100779392 403.29