Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2821 ATGTGGTtttcatcaccaccaccaactTGTGTGGGTTGGTACAAGTTGTTAGCTAGTTTTGTACCTACAGGTGATGAGAGGTTATTGCGTGTACATGCTCCACCACATCATCATTCCTCATACCAAGTTTTTATCAATGGAGGGATATTACTTGGATACATATCAAACTATGCGTTTTCGAAGATGACACTAAAGTTGGGTTGGCGAATGATGCTTGGAATCGGTGCAATTCCTTCAGTACTCCTTACGGTGGGAGTGTTGGCGATGCCCGAGTCCCCACGATGGCTTGTGATGAGGGGTCGTTTGGGAGAAGCAACAAAAGTCCTTAACAAAACCTCTGACACCAAGGAAGAGGCTCAGCAAAGGCTAGCTGACATCAAACAAGCCGCAGGGATCCCTGAGAATTGCAACGATGACATCGTTCAGGTGACCGAGCGAAACACCGGTGAGGGTGTATGGAAAGAGCTGTTCCTTTATCCAACGCCCACGGTTCGTCACATCTTAATCGCTGCCCTCGGGATTCATTTCTTCCAACAAGCGTCGGGCGTAGACGCTGTCGTTTTGTACAGCCCTAGGATCTTTGAAAAAGCAGGGATCACGAGCGACAGAAACAAGCTTCTCGCAACCATGGCCGTTGGATTCGTCAAGACCATGTTCATATTGGTCGCTACGTTTATGTTGGACCGCGTGGGTCGTCGTCCGTTGTTATTGTCTAGTGTCGGGGGCATGGTGCTCTCGCTTCTCACGCTCGCCATCAGCCTCACCATCATTGATCACTCGGAGAAGAAACTAATGTGGGCCGTTGGATTAAGCATAACCATGGTGTTGTCCTACGTGGCCACTTTCTCGATCGGTGCGGGACCCATCACATGGGTCTACAAGCTCCGAAATCTTTCCGTTGAGGCTGCGGGCACAGGGTGCTGCTGCGGGGGTTATGGTGAATAG 945 0.491 MWFSSPPPTCVGWYKLLASFVPTGDERLLRVHAPPHHHSSYQVFINGGILLGYISNYAFSKMTLKLGWRMMLGIGAIPSVLLTVGVLAMPESPRWLVMRGRLGEATKVLNKTSDTKEEAQQRLADIKQAAGIPENCNDDIVQVTERNTGEGVWKELFLYPTPTVRHILIAALGIHFFQQASGVDAVVLYSPRIFEKAGITSDRNKLLATMAVGFVKTMFILVATFMLDRVGRRPLLLSSVGGMVLSLLTLAISLTIIDHSEKKLMWAVGLSITMVLSYVATFSIGAGPITWVYKLRNLSVEAAGTGCCCGGYGE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2821 314 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 314 IPR020846 GO:0022857
Ssu3g2821 314 Gene3D MFS general substrate transporter like domains 33 311 IPR036259 -
Ssu3g2821 314 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 41 310 IPR045262 GO:0015144
Ssu3g2821 314 PANTHER SUGAR TRANSPORTER 41 310 - -
Ssu3g2821 314 SUPERFAMILY MFS general substrate transporter 28 306 IPR036259 -
Ssu3g2821 314 Coils Coil 102 129 - -
Ssu3g2821 314 Pfam Sugar (and other) transporter 39 293 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2821 Ssu-Chr3 82605578 82615693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2821 38 310 Organic Solute Cotransporters AT3G18830 67.153 3.09e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2821 - - gmx:547958 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2821 3 82605578 82615693 Ssu8g0338 8 5576208 5579296 PCT