Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2816 ATGGAGtcccaaaaaaacaaagaagttGCCAAGCCTGACCAAATTTCTGTGCATCAAGATgAAACACAGAAACTACAGAAACCCTTGCCACTTCCTTGGTCTACTTCTACACAGATATGGAATAGGCCATTTCAATATGGTTCTCTATATGGTGGGAGCATGCTCTCTAATTATCCTATGGCAGCTGGGAGTGCTCTTTTAGCTTCTGCTGAAAAAAACATGAATTCAATGAACATATTTAACAAGAGCTTACAACCTATAACTAAGGAATCAAGAGAAAATGGGAAAAGACCTTCAATCCCAGAAACCATCTGGGAAAAACTAACAAGGAGTGCGGCTAGTGAAAGCATGGAAACAACAGTTGTAGGCCATGATGTTAACAATGCTGGTGGGTCTACAAAATTTTCACCAAAGCTGCAGGATTTCCCTTCAACTAAGAAGCAGCAATCCAGTATGATGCCCAGCAATGGGGGAGGTGAACACAACGTGAATAGTATTGAAAATTGTAAAGCTGTTCATGTGAATAGAAATGTTGCATCGGATCATTTCGAAGCAAATCCAACTGAGCGGAATCAGAATTTGGGTACAGACACCAATGCATCTGGCACTAATCCTCAACTTGAAAGGGAGGAAGCTGATGAAAcagaagaacaaagaaaaagggaggCAAAGAAGAAATCATCTAAGAGATCAAGGATGAAGATAGCGCTGCAGGATTTCTCTTCAATTAAGAAGCAGCAGTCCAGTACGATGCCTGGAAATGGGGGAGGTGAACACAATGTGACTAGTTTTGAAACTTGTAATGCTGTTCATGAGAATACAAATATTGCATCGGATCATTTTGAAGCAAACCCAACTGAGCTGAATCAGAATTTGAGTACAGACCCCAATGCATCTGGCACTAATCCTCAATTTGAAGGGGAGGAAAGTGATGAATcagaagaacaaagaaaaaggcgGCGGGCAAAGAAGAAATCATCTAAGAGATCAAAGATGAAGATAGAGAAAGAACGTGCAAAGCTAATTGATTCTGTGGACAATCTTGATGCTGAAAACGCTGCACTCAAGAAACAGCTTCTGGATCTTTCTGATGAGTGTGTGAAGCTCACAGAAGAAAACAATTCCTTAATGGAAGAGCTGGTTGAGAAGTATGGTCTAGAAACAATAGTGAATCTTATGAACGCAAAGCCTACTGACTCGGTTGCTGGTGGTGGTCAAAGCTGA 1224 0.3889 MESQKNKEVAKPDQISVHQDETQKLQKPLPLPWSTSTQIWNRPFQYGSLYGGSMLSNYPMAAGSALLASAEKNMNSMNIFNKSLQPITKESRENGKRPSIPETIWEKLTRSAASESMETTVVGHDVNNAGGSTKFSPKLQDFPSTKKQQSSMMPSNGGGEHNVNSIENCKAVHVNRNVASDHFEANPTERNQNLGTDTNASGTNPQLEREEADETEEQRKREAKKKSSKRSRMKIALQDFSSIKKQQSSTMPGNGGGEHNVTSFETCNAVHENTNIASDHFEANPTELNQNLSTDPNASGTNPQFEGEESDESEEQRKRRRAKKKSSKRSKMKIEKERAKLIDSVDNLDAENAALKKQLLDLSDECVKLTEENNSLMEELVEKYGLETIVNLMNAKPTDSVAGGGQS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2816 407 SMART brlzneu 312 375 IPR004827 GO:0003700|GO:0006355
Ssu3g2816 407 PANTHER G-BOX-BINDING FACTOR 3-RELATED 34 234 IPR044827 GO:0003700|GO:0006355|GO:0043565
Ssu3g2816 407 PANTHER G-BOX-BINDING FACTOR 3-RELATED 242 398 IPR044827 GO:0003700|GO:0006355|GO:0043565
Ssu3g2816 407 PANTHER BZIP TRANSCRIPTION FACTOR 34 234 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 182 206 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 1 20 - -
Ssu3g2816 407 Coils Coil 331 379 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 182 262 - -
Ssu3g2816 407 PANTHER BZIP TRANSCRIPTION FACTOR 242 398 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 240 262 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 126 164 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 207 223 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 286 306 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 286 335 - -
Ssu3g2816 407 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2816 311 392 bZIP Transcription Factor Family AT4G36730 39.759 4.93e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2816 - K09060 ccaj:109801299 346.665