Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2789 ATGGCTTCTTCCGACAGCAAACTTCCCCTGAAGCCAATCCCCGGAAGCTACGGCCTCCCCTTCTTCGGACCGATGAGCGACAGACACGACTACTTCTACCACCAAGGACGCGACAAGTACTTCGCCACCCGAATCCAAAAGTACAACTCCACCGTCATCCGAACCAACATGCCGCCCGGTCCCTTCATTTCCTCAAACCCTAGAGTCATCGCCCTCCTCGACGGCGTCTCCTTCCCCATCCTCTTCGACAACTCAAAAGTCGAAAAGCGCGACGTCCTCGACGGCACCTTCATGCCCTCCACCTCCTACACCGGCGGCTACCGCGCGTGCGCCTTCCAGGACACCGCCGAGCCCTCCCACGCGCTCCTCAAGCGCTTCTACCTCAACCTCCTCGCCGCCAAACACGACGCCTTCCTCCCCCTCTTCCGCAACAACCTCGCCGAGCACTTCGCCGACCTCGAAGACAAGCTCGCCGGAAAATCCGGCAAGGCCAGCTTCAACTCCTCCGTGGGCTCCGCCACGTTCAACTTCCTCTTCCGCCTCCTCACCGACAAGGACCCCGCCGAGACCAAAATCGGCTCCGACGGCCCCACGCTCGTCCAAACCTGGCTCGCGGCTCAGCTCGCTCCACTCGCGACCCTCGGCTTGCCGAAGATATTCAACTACGTCGAAGATTTCCTGATCAGAACGATTCCCTTCCCCGCGTGGACCGTGAAGTCAAGCTACCAGAAACTCTACGAAGGTTTCTCTTCCGCGGGCACGGCGGTGCTCGACGAAGCGGAGCGCGTGGGGATAAAGAGGGACGAAGCGTGCCACAACCTGGTTTTCATGCTTGGGTTCAACGCGCAGGGTGGGTTAGTGAACCAGTTTCCGATTCTAATCAAGTGGCTCGGATTGGGTGGCGAGGGTTTGCACACACAGCTCGCGGAGGAGATCAGGGCCGTTGTTAGGGACGAAGGCGGGGTCACTCTCCGTGCGTTGGATAAGATGACTTTGACCAAATCTGTGGTGTATGAAGCGCTGAGAATAGAGCCTGCTGTGCCGTACCAGTACGCGAAGGCGAGGGAGGATCTGGTGGTGGAGAGCCACGATGCGGCCTATGAGATCAAGAAGGGGGAGATGATCTTTGGATATCAGCCGTTCGCTACCAAGGATCCGAAGATCTTTGAGAACGCCGAGCAGTTCGTGGCGGATAGGTTCGTTGGACATGATGGGGAAAAGATGTTGCGACACGTGTTCTGGTCCAACGGACGCGAGACGGACGACCCCACACCGGATAATAAACAGTGCCCCGCCAAGAATCTGGTGGTGCTCTTGTGCAGGCTATACTTGGTGGAATTCTTCCTGCGCTACGACACGTTTACGATCGACTTTAAACCAGTTGTACTGGGTCCCGACGTTACCATCAAGTCACTCACCAAGGCCTCCTCATTCTGA 1437 0.5783 MASSDSKLPLKPIPGSYGLPFFGPMSDRHDYFYHQGRDKYFATRIQKYNSTVIRTNMPPGPFISSNPRVIALLDGVSFPILFDNSKVEKRDVLDGTFMPSTSYTGGYRACAFQDTAEPSHALLKRFYLNLLAAKHDAFLPLFRNNLAEHFADLEDKLAGKSGKASFNSSVGSATFNFLFRLLTDKDPAETKIGSDGPTLVQTWLAAQLAPLATLGLPKIFNYVEDFLIRTIPFPAWTVKSSYQKLYEGFSSAGTAVLDEAERVGIKRDEACHNLVFMLGFNAQGGLVNQFPILIKWLGLGGEGLHTQLAEEIRAVVRDEGGVTLRALDKMTLTKSVVYEALRIEPAVPYQYAKAREDLVVESHDAAYEIKKGEMIFGYQPFATKDPKIFENAEQFVADRFVGHDGEKMLRHVFWSNGRETDDPTPDNKQCPAKNLVVLLCRLYLVEFFLRYDTFTIDFKPVVLGPDVTIKSLTKASSF 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2789 478 Pfam Cytochrome P450 306 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2789 478 SUPERFAMILY Cytochrome P450 8 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2789 478 Gene3D Cytochrome P450 4 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2789 478 PANTHER FATTY ACID HYDROPEROXIDE LYASE 5 476 - -
Ssu3g2789 478 PANTHER CYTOCHROME P450 26 5 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2789 Ssu-Chr3 82176664 82178100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2789 8 476 Cytochrome P450 AT5G42650 51.489 1.01e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2789 K01723 - gmx:100810890 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2789 3 82176664 82178100 Ssu3g2789 3 82176664 82178100 ECH