Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2766 ATGACAACCTTGGATATGCCTACTATGGCCTCCTCTCTGCTTCTCCCACTTGGTAACCCCATTCACTTCGCCCACTCAAGTTCTACTTGTGGTAGAAGTCCCTCTTTTACTCCTCCTCAAAGCATTTTAGTTGACAAACTTCGAAGATTAGTTGTTAAAGTCAAGTCCTCAGAGACAAGGGAATGCACTGCTATGTTTAATGCCAATTCGCGTAGAGATTTTCTTGGGTTGGCTTTAGGAGTCTCAGGTCTCTTCATCCATTCGTTGGATGCAAATGGAGCTGGTTTGCCCCCAGAGGAAAAGCCAAAACTATGTGATGACACTTGTGAGAAAGAGCTTGAAAATGTGCCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGGCAAGGCCCTAGTCCACCAGTTGGATTTCAGGTGGCCGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCACTGGAGAAAGGTCAGCCTTACATTTTTCGCGTTGGTTCTGGTCAGGTGATAAAGGGACTTGATGAAGGTATTCTGAGCATGAAGGTAGGAGGAAAGCGTCGATTGTACATACCTGGATCACTGGCATTCCCAAAAGGCCTCAATTCTGCTCCTGGAAGACCAAGGGTGACTCCGAGCAGTCCAGTCATATTTGATGTTAGTTTGGAGTATGTTCCCGGACTAGAACTGGATGAGGAATAA 723 0.4454 MTTLDMPTMASSLLLPLGNPIHFAHSSSTCGRSPSFTPPQSILVDKLRRLVVKVKSSETRECTAMFNANSRRDFLGLALGVSGLFIHSLDANGAGLPPEEKPKLCDDTCEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGKRRLYIPGSLAFPKGLNSAPGRPRVTPSSPVIFDVSLEYVPGLELDEE 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2766 240 Gene3D - 103 232 IPR046357 GO:0003755
Ssu3g2766 240 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 39 240 - -
Ssu3g2766 240 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 141 233 IPR001179 GO:0003755
Ssu3g2766 240 SUPERFAMILY FKBP-like 105 229 - -
Ssu3g2766 240 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 141 229 IPR001179 GO:0003755
Ssu3g2766 240 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 39 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2766 Ssu-Chr3 81977445 81980790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2766 122 229 Calmodulin-binding Proteins AT3G25230 37.615 1.76e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2766 K01802 - gmx:100818743 410.609