Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2741 ATGCTAGGGAAGTACCTTGAGGTTTTGGACAAAGGGAAGACATCCAATGCAATGGCCAAGTTCATGAACTTGACACCTAACACTGCTACATTGTTGACCCTGGACAGTGAAGGGAACGTTGTTGGTGAGGAGGAAATTTATAGCAGGTTCATTCAGAAGAATCACGTGATTAAAACTATTCCTGGTGCAAAAGTGGCTTCAAATGGATTTGTTATCTGGGGCGTGACACATTTTGGCATGGTCAAAGCTGGTCCATGTGCTTTAGGTTTGGCAACACCTACTGCTGTGGTCATAACATTGCTTCATTCTAACACATGGGAGCTAGACTAA 330 0.4364 MLGKYLEVLDKGKTSNAMAKFMNLTPNTATLLTLDSEGNVVGEEEIYSRFIQKNHVIKTIPGAKVASNGFVIWGVTHFGMVKAGPCALGLATPTAVVITLLHSNTWELD 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2741 109 PANTHER ATP7, ISOFORM B 1 77 - -
Ssu3g2741 109 Gene3D - 11 81 - -
Ssu3g2741 109 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2741 Ssu-Chr3 81686921 81687645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2741 1 77 Primary Pumps ATPases AT1G63440 71.429 6.68e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2741 K17686 - gmx:100789164 119.012