Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2738 ATGGGATTCTCATTAAAACACCTATTAATCTACGGTTTGAATGTGCACCTATGCTCAGTTGGGCTTCTATTTGAGCTGGTGGTTTTATCACACTTGTGGTTGCCGGTTACAAGCCTTGGCTCCATGTCATCCATTGCCATCTCTTATGGCGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACTGTGACATGTTATGGATCCAACTCAGCCATAATGTATGGAACACCAACCCATTTCTCATTTCTTGGTCTAACTGCTGGAAATGGCTTTGTCTGTGGGCTTCTAATGGGTTCTAATCAACCCTACTGCTGGGGTAGCAGTGCCTATATTGAAATGGGTGTGCCTCAACCTATGATCAAAGGAGCACAGTACCTAGAAATCAGTGCCGGTGATTACCATGTTTGTGGCTTGAGGAAACCTCTGACTGGAAGACACAGGAACATTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAGAACTATGTGTTTGGTGGACAGATTCAATCAATCTCAGCTGGTTCTGAATTCAATTGTGGCCTTTTTTCTCAGAACAGGACTGTGTTCTGCTGGGGTGATGAGACTAATAGCCTAGTGATTAGTTTGATTCCACACATGagattccagaaaatttccgcTGGTGGGTACCACGTGTGTGGAATCTCAGAAGGGGTGAATTCCAAAACTGTTTGTTGGGGGAGAAGCTTGGACCTTGAGGAAGAAATTCCAGTGGCACATGCAGGTCAAGGAAACGTTGATTTGGCTCCAAATGACCCCATGCTTTCTGTAGTGGGAGGGAAGTTCCATGCATGTGGCATTAAGAGCTATGATCGTGGAGTGATTTGTTGGGGCTTTATCATCAAACCAAGCACTCCATCTCCTAGAGGGATTAAGGTCTTTGAGGTTGCAGCTGGTGATTATTTCACTTGTGCAGTTCTTGTTGAGAAATCTCTTATGCCTGCATGTTGGGGTGTTGGTTTTCCCGCCTCTCTTCCTTTAGCTGTTTCACCAGGAATGTGCCAACCTGCTCCATGTCCTCCTGGTTTCTATGCCATTGATCAGCACAAGGGTCTTTGCAAGTCGCCAGATTCACGTGTTTGCATGCGATGCAGTGGTGCTTGTCCTCCTGAAATGTATCAGAAGAGTGCATGTAATTTGGCTTCTGATAGACTATGTGAATATAACTGTTCCTCTTGTTCTTCATCCGAATGCTTCTTGAACTGCTCCTCTTCATATTCCAATGCTGCCACCGAGAAGAAAACTGAAAAATTTTGGGCTCTGCAGCTGCCAGTTGTTATTGCTGAGATTGCTTTTGCAGTTTTTATAGTCAGTATTGTGTCATTGACTTCAGTTTTGTACGTCCGCTACAGGCTAAGAGATTGTGAGTGTTCAAAAGGGTCAAAGATGAAGAAAGTTAATGGGAGTTCTTCCCTCCAGAACGAGAACAGCAAGGTGCGGCCAGATTTGGAGGAGTTTAAGATCCGAAGGGCTCAAATGTTCACCTATGAGGAGCTTGAAAGTGCAACCGGTGGATTCAAGGAAGAGTCCATAGTAGGGAAGGGAAGTTTCTCGTGTGTGTTCAAGGGAGTTTTGAAAGATGGGACAGTTGTTGCTGTTAAAAGGGCCATAGTGTCTCCCAACATGCAGAAGAATTCCAAAGAGTTTCACACGGAACTTGACTTACTCTCAAGGTTGAACCACGCTCATTTGCTTAACCTTCTAGGCTATTGTGAAGAAGGAGGAGAGAGGCTTCTTGTGTATGAGTTCATGGCTCATGGCTCTTTGCACCAACACCTACATGGGACAAACCAAGTGTTGAGGGAGCAGTTAGATTGGATAAGAAGGGTGACAATTGCAGTCCAAGCAGCACGTGGAATCGAATATTTGCATGGCTACGCTTGCCCTCCTGTGATTCACAGAGACATCAAGTCCTCAAACATCCTCATTGATGAAGAACACAATGCAAGAGTGGCTGATTTTGGTTTATCATTGTTGGGTCCTGCAGATAGTGGTTCTCCACTGGCTGAACTCCCAGCTGGGACTCTTGGCTATCTTGATCCTGAATACTATAGGCTTCACTACCTCACAACCAAATCTGATGTTTATAGCTTTGGTGTTCTCCTTTTGGAAATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATCAAGTCAGGAGATATAACTGCAATTTTGGACCCGGTTCTAAAACCCCCTCCTGATCTTGAAGCCTTGAAGAGAATAGCCAATGTGGGTTGTAAGTGTGTGAGAATGAGAGGGAAAGAGAGGCCCTCAATGGATAAAGTAACAACAGCTTTGGAGAGGGCTCTTGCACAGTTAATGGGTAGTCCATGCATTGAGCAGCCTATTTTGCCCACTGAGGTGGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAAAGATCCTCAAACCGGTCAGTTTCTGAGACTGATGTAGCAGAAACTGAGGACCAAAGGTTTGAGTTTAGAGCACCCTCATGGATAACTTTTCCCAGTGTCACATCCTCTCAAAGGAGAAAGTCATCAGTGTCTGAGGCAGATGTTGATGGGAAGAATGCAGAAGGGAAGAACTTGGGCAATGTTGGAGGGGGAGGTGATGTTTTGAGAAGCCTTGAGGAAGAGATTGGTCCTGCTTCTCCAGGAGAGAGGCTGTTCTTGCAACACAACTTCTAA 2748 0.4472 MGFSLKHLLIYGLNVHLCSVGLLFELVVLSHLWLPVTSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGSNSAIMYGTPTHFSFLGLTAGNGFVCGLLMGSNQPYCWGSSAYIEMGVPQPMIKGAQYLEISAGDYHVCGLRKPLTGRHRNISLVDCWGYNMTKNYVFGGQIQSISAGSEFNCGLFSQNRTVFCWGDETNSLVISLIPHMRFQKISAGGYHVCGISEGVNSKTVCWGRSLDLEEEIPVAHAGQGNVDLAPNDPMLSVVGGKFHACGIKSYDRGVICWGFIIKPSTPSPRGIKVFEVAAGDYFTCAVLVEKSLMPACWGVGFPASLPLAVSPGMCQPAPCPPGFYAIDQHKGLCKSPDSRVCMRCSGACPPEMYQKSACNLASDRLCEYNCSSCSSSECFLNCSSSYSNAATEKKTEKFWALQLPVVIAEIAFAVFIVSIVSLTSVLYVRYRLRDCECSKGSKMKKVNGSSSLQNENSKVRPDLEEFKIRRAQMFTYEELESATGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGTNQVLREQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDITAILDPVLKPPPDLEALKRIANVGCKCVRMRGKERPSMDKVTTALERALAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSVSETDVAETEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNAEGKNLGNVGGGGDVLRSLEEEIGPASPGERLFLQHNF 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2738 915 SUPERFAMILY Protein kinase-like (PK-like) 497 790 IPR011009 -
Ssu3g2738 915 MobiDBLite consensus disorder prediction 858 890 - -
Ssu3g2738 915 MobiDBLite consensus disorder prediction 818 841 - -
Ssu3g2738 915 MobiDBLite consensus disorder prediction 818 834 - -
Ssu3g2738 915 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 349 397 IPR001368 GO:0005515
Ssu3g2738 915 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 19 915 - -
Ssu3g2738 915 PANTHER RECEPTOR-LIKE KINASE 19 915 - -
Ssu3g2738 915 SMART serkin_6 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2738 915 ProSiteProfiles Protein kinase domain profile. 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2738 915 Gene3D - 88 346 IPR009091 -
Ssu3g2738 915 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Ssu3g2738 915 SUPERFAMILY RCC1/BLIP-II 37 290 IPR009091 -
Ssu3g2738 915 Gene3D Transferase(Phosphotransferase) domain 1 595 800 - -
Ssu3g2738 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Ssu3g2738 915 Gene3D Phosphorylase Kinase; domain 1 487 594 - -
Ssu3g2738 915 Pfam Protein tyrosine and serine/threonine kinase 520 789 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2738 Ssu-Chr3 81620419 81623166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2738 22 915 Receptor kinase-like Gene Family AT3G59420 69.069 0.0 1259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Ssu3g2738 PK_Tyr_Ser-Thr 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2738 - - gmx:100797455 1720.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2738 3 81620419 81623166 Ssu8g0372 8 5920864 5923497 PCT