Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2737 ATGGGGCACAGttcgaagaagaagaagcgcGGAGGAGGCAGCGGTCGCCGGAGCAAGGGAAGAACACAGTCCAAAGATCACGCTTCTCAATTCGGCGCCGACGATTACGACCAGCTCTCCGAAGAGATTACCGCATTGCCTTATTCAAAGGACATGGGTTATGAGGACTCAGACGTTTCTGCTGTTCTTGCTGTCAGGTGCTTGCCTGGGTATCCCTTCAAGTGCCCGAAGTTGCAGATTACTCCGGAGGAAGGGTTATCAGAAACTGATGCTGACAAGCTCTTgtctctcctccatgatcagGCTACTTTAAATGCTAGGGAGGGACGAGTAATGATCTATAATTTGGTTGAGGCTGCTCAAGAATTTCTGTCTGGGATTGAGCCAATTGCCAAATCAAATGATTCTAAGCTTTTACACTCAACTGTGGAAAGCAATGAAGAATTGTTTCCCAAGGATATGGCATCTTTAAATAAGAAGGGTTCTTTTGTTTATGGATTTATAGACCTTTTCAGTGGCTATGGAGAAACATGGAGTTGGGGTTTTGGAATGGATGAAACTGCTGGAAAAAGTTCTTCTCTTCGTCCGTCGAAGTTAGATGCCTCAAAACCATGTTTTGAGGCTCAGGAGAAGAAATCTGATAGTAAGGAAACACCGTTAATAGTGCAAGAACTTCCTGCCAAATTAGATACTGTTGGAGAAGTTAGTGAAGACGGCAACAATAGTTTTTCTTTGACTCATTCAAGTAGATCTTTGGTGGAGGATTTTGTAGGGAATGACAATGAAGGTGAGAAAGAGTATGTTATTGTTGATGAGTATACAACAGAAGATAATGAAGGTATTAATGAAAGCGAGTCTTCAGAGTCTCTGTCTTCTGCATCCTTGCCTCATCACCAACCATCTCAAACAGTTGAAAAGGATCTAATAatgGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAGGGAACATTGGCTGCCTGTTTGCCACAATTGGTAACAGAGCTGTACAATTTAGGGATCATTTCTGACTCAGCACATGATATGGCATCTGAACCACGTTCCATTTTCAACAAAACCTTTGATCGTGTTTTCCAGAAACACCTGGCTTCATCCAGAATATCCCAATTTTGGAAACCTGATCTTGGAGGCTCAAACACAGTTCCCCACAGTTCTcgatatttgaatgattttgaGGAGCTACGGCCTCTTGGTCATGGTGGTTTTGGTCATGTCGTATTGTGCAAAAATAAACTGGATGGAAGGCAGTATGCAGTAAAGAAAATTCACCTCAAGGACAAAAGTATGCCTGACCGAATATTAAGGGAAGTAGCTACACTTTCTCGTTTACAGCATCAACACGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTATGGTGATTCTGCTTGGGGTTCAAAGACTACAGTAAGCTCTACTTTCAACTATAAAGCTGCAACCTCCAACGATGCCTTTGGGCATGAGAATCAGCCTGAATCAACTTACCTTTATATACAAATGGAGTACTGTCCCAGGACCCTTCGCCAGGTGTTTGAATCATATAATCATTTTGACAAAGAACTGGCTTGGCATTTGTTTCGCCAAATAGTGGAGGGCTTGGCACACATACATGGACAAGGAATAATTCATCGGGACTTAACACCAAGTAACATATTCTTTGATGCCCgcaatgatattaaaattggTGATTTTGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGACCTGGGTCATCCTGCTGATACAACTGGAGTTTCAATTGATGGCACTGGACAAGTGGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTCGGGACAGCAATGGAGAGACATCTTGTTTTATCTGATCTGAAACAGAAAGGGGAAGTTCCACCTACTTGGGTTGCTGAGTTTCCAGAACAGGAGTCCTTGCTGCGGCAGTTAATGTCTCCGGCTCCTTCAGATCGCCCTTCTGCCACAGAACTTCTGCAAAATGCATTTCCTCAACGAATGGAGTCCGAATTATTGGATGATATCCTACGAACAATGCAGAAATCAGAGGATACGAGTATATATGATAAAGTTTTAAATGCTATCTTTGACGAAGAGATGTTAAGCACAAAACACATTCGTCATGTTGGTAGATTGGGATCAGTTGGAGTTGGAGATAACAGTTCATCCATTCAGTACACAGATTTTGAAACTGAGGTTCGAGATTCTGTTGTAGATGTGAACAGGGAAATTTTCAGACAGCATTGTGCAAAGCACCTAGAAATATCAACAATGCGATTATTGGATGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTGACCCATGGAGGAGACATGCTTGAACTTTGCCATGAGTTGCGTTTGCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATGTGTCTTCAGAAGAGCAGTTGGACATTCATCACCAAACCGCTACCTTCAGGGAGATTTTGACATTATTGGTGGTACCTCAGCATTGACAGAAGCAGAGGTCATAAAGGTCACAACGGACATAGTCACTTGTTTTTTCCATGCAGACTCATGTGACATTCATCTCAACCATGGTGACCTTCTGGATGCAATTTGGTCATGGATTGGAGTCAAGGTAGAACACAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGGCAGCTTTTGCAGGAACTGAATTTAGCAGAGGCTATGGTAAATAGGTTACAGACTGTAGGTTTAAGATTCTGTGGATCTGCAGATCAGGCACTCCCCCGATTAAGAGGAGCTCTTCCATCTGATAAACGTACATTCAAGGCACTTGATGAATTGTCAGAACTTGTCAGTCTCCTGAGAATTTGGAagattgacaaaaatatctACATAGATGCATTAATGCCACCAACTGAAAGTTATCACAGAGATTTGTTTTTTCAGGTATACTTACGGAAGGAGAACAGTCCTGGATCTCTCTCCGAAGGTGTCTTGCTGGCTGTTGGTGGTCGATATGACTATTTGCTTCATCAGTTGTGGAGTAGCGACTATAAAGGAAATCCTCCCACTGGTGTGGGGACTAGCCTTGCACTGGAGACAATAATTCAGAATTGTCCTGTAGATTTCAAGCCCAATAGAAACGAAGCCAGCATTAATATTCTTGTCTGTTCTAGAGGAGGAGGTGGTCTGCTGGTGGAGCGCATGGAGCTAGTTGCTGAATTATGGGAGGAGAACTTTAAGGCTGAATTTGTTCCTACCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGTCTTGCCATCATCACAGATACAGATCTCTCCAGGACAGATTCTGTCAAGGTTCGACACCTTGAACATAAGAAGGAGAAAAGTGTTGAGAGAAAAAACCTAATCAAGTTTCTATTGGATGCTATGGCAACACAATTTAGAAATCCCTCCATTTGGATTTGA 3642 0.4138 MGHSSKKKKRGGGSGRRSKGRTQSKDHASQFGADDYDQLSEEITALPYSKDMGYEDSDVSAVLAVRCLPGYPFKCPKLQITPEEGLSETDADKLLSLLHDQATLNAREGRVMIYNLVEAAQEFLSGIEPIAKSNDSKLLHSTVESNEELFPKDMASLNKKGSFVYGFIDLFSGYGETWSWGFGMDETAGKSSSLRPSKLDASKPCFEAQEKKSDSKETPLIVQELPAKLDTVGEVSEDGNNSFSLTHSSRSLVEDFVGNDNEGEKEYVIVDEYTTEDNEGINESESSESLSSASLPHHQPSQTVEKDLIMVHMLRLVCASKGTLAACLPQLVTELYNLGIISDSAHDMASEPRSIFNKTFDRVFQKHLASSRISQFWKPDLGGSNTVPHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAVKKIHLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSYGDSAWGSKTTVSSTFNYKAATSNDAFGHENQPESTYLYIQMEYCPRTLRQVFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGHPADTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHLVLSDLKQKGEVPPTWVAEFPEQESLLRQLMSPAPSDRPSATELLQNAFPQRMESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKHIRHVGRLGSVGVGDNSSSIQYTDFETEVRDSVVDVNREIFRQHCAKHLEISTMRLLDDCPQFNRNAVKLLTHGGDMLELCHELRLPFVNWIISNQKSSFKRYEISCVFRRAVGHSSPNRYLQGDFDIIGGTSALTEAEVIKVTTDIVTCFFHADSCDIHLNHGDLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRTFKALDELSELVSLLRIWKIDKNIYIDALMPPTESYHRDLFFQVYLRKENSPGSLSEGVLLAVGGRYDYLLHQLWSSDYKGNPPTGVGTSLALETIIQNCPVDFKPNRNEASINILVCSRGGGGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLAIITDTDLSRTDSVKVRHLEHKKEKSVERKNLIKFLLDAMATQFRNPSIWI 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2737 1213 Coils Coil 950 970 - -
Ssu3g2737 1213 ProSitePatterns Tyrosine protein kinases specific active-site signature. 552 564 IPR008266 GO:0004672|GO:0006468
Ssu3g2737 1213 MobiDBLite consensus disorder prediction 284 299 - -
Ssu3g2737 1213 SUPERFAMILY Class II aaRS ABD-related 1106 1203 - -
Ssu3g2737 1213 ProSiteProfiles RWD domain profile. 22 127 IPR006575 GO:0005515
Ssu3g2737 1213 ProSiteProfiles Protein kinase domain profile. 397 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2737 1213 Gene3D - 1104 1203 IPR036621 -
Ssu3g2737 1213 Gene3D Phosphorylase Kinase; domain 1 385 513 - -
Ssu3g2737 1213 SUPERFAMILY Class II aaRS and biotin synthetases 763 1092 IPR045864 -
Ssu3g2737 1213 ProSitePatterns Protein kinases ATP-binding region signature. 403 427 IPR017441 GO:0005524
Ssu3g2737 1213 PANTHER EIF-2-ALPHA KINASE GCN2 45 1213 - -
Ssu3g2737 1213 Gene3D Bira Bifunctional Protein; Domain 2 761 1097 IPR045864 -
Ssu3g2737 1213 PANTHER HISTIDYL-TRNA SYNTHETASE 45 1213 - -
Ssu3g2737 1213 SMART RWD2001b 28 127 IPR006575 GO:0005515
Ssu3g2737 1213 MobiDBLite consensus disorder prediction 1 36 - -
Ssu3g2737 1213 CDD STKc_EIF2AK4_GCN2_rpt2 390 697 - -
Ssu3g2737 1213 SUPERFAMILY UBC-like 43 124 IPR016135 -
Ssu3g2737 1213 Gene3D Transferase(Phosphotransferase) domain 1 516 710 - -
Ssu3g2737 1213 Pfam Histidyl-tRNA synthetase 850 1090 IPR041715 -
Ssu3g2737 1213 MobiDBLite consensus disorder prediction 1 16 - -
Ssu3g2737 1213 Pfam Anticodon binding domain of tRNAs 1107 1205 IPR024435 -
Ssu3g2737 1213 SUPERFAMILY Protein kinase-like (PK-like) 393 717 IPR011009 -
Ssu3g2737 1213 MobiDBLite consensus disorder prediction 275 299 - -
Ssu3g2737 1213 Pfam RWD domain 54 124 IPR006575 GO:0005515
Ssu3g2737 1213 Pfam Protein kinase domain 397 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2737 1213 Gene3D Ubiquitin Conjugating Enzyme 25 133 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2737 Ssu-Chr3 81583311 81608380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2737 394 703 CBL-interacting serine-threonine protein kinases AT5G45820 27.586 2.84e-22 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Ssu3g2737 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2737 K16196 - gmx:100797996 2219.89