Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2715 ATGGCAGTTGGACTGAGCTTGTCACTTGATGTCGACAGGTTTCACAGATTTCCGGTTTCAAATTCACACAAGATGGATCTGGAAAGATCAATAGAGGACCAGTTCTCCAAGTTGCACCCTTCCTTGCCAGAAAACACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGCAGCTTATGCACTAGCCAGGCTTGGTTATAAGAATATCACAGTTTTGGAGAAACAACATACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTGGGTGGACAAGTTCTTGCAGCAAGCAGTGCTCCAGTCATTTTTCACTTGGCAAGAGAGACAGGCTCAGCACTAGAAGAATTGGATTCCCACAAGCTTGCTGTAATTGACCCTTCCTCTGGAGAATATCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATCCAAGAAAAGGTGAAGAATTCTGGTCGTATTGGGGTCCATGCCGTTAGTGACATTGCTTCAGACTTAACTCCAGAATATCTTGAGCATCATGGACTCAAATCTGTTCCCAAATCAGTAGCTTATGGTTACACTGCTTCGGGATATGGATTTATTCAAGACATGCCTTATGCCTACCTTCATGAATTTACTAGAACATCAATGGCTGGAAAAATTCGACGATTTAAGGATGGATATACTTGTCTTTGGCAGAAGATTGCTGAATCACTTCCTTTAACACTTCACTGTAACACTGAAGTATTGGCGATCAGGCGGAACTCTGATGGTGTCACCGTTAATGTCAAGAGCTTAAATCAAGTTGAAAGTTTGGAATTTGATAAGATCATAATCTCTGGCTCATTTCCATTAAAATATGGAAGAACTTATAGGTCATTGCCTTCAACTTGCATAGATTGTGAAGCAGAAGTAATGGATGCAAGTGACCTTGAAAAGGATTTGTTCAGCAAAGTAGAGATAAATGACTACTACACCACTGTTTTAAAGATTAAAGGGCTAGAGCATTTGCCTgttggattttattattttggtgaaTATATGGAAGATCCTAGCACAATTGGACATCCAGTTGCAATGCAGAGATTTTATGGTGACActaatatattcttattctgGTCCTATGGCAACTCTGTTGATATTAAGGGACCAACAGTCACGGAGCTTGCGATCAAGACAATAGTAGCCATGGGGGGAGAAGTTGAGAGTGTCATTCTTCAACGCCGCTTTATGTATTTTCCTCATGTTGGCAGCCGAgATATGAAAGATGGGTTTTATGAAAAGTTGGAGTCAAAGCTTCAAGGTTCAAGGAATACTTATTATGTAGGTGGACTTATGGCGTTTGAGCTTTCAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAACTTTGCAAATAGCAATGATTTCCCAATATTTCCCTACACTAAGAATTTGTTTCCCTTGCAAGCTGAGTGCCAGCAAAAGAATCCTAGAGAATTAGGAGAATTGGGAGAAGTGCAATTTCCTAATTTGCCTACTTTGAACAGCTACTTAAAGCACTGGGGAACTCATCCAATCACTCAAAACAAGACTCTTTATACTTGGATTAACGAAGACGGGACTCCAGTATGCCAGAGGACCTATGGAgaactatattttaattcttcttgcattgctcaTAAGCTCCTAACAAGCCAAAAGCCACTTATCAAACCTGGTGACAAGGTTCTCCTGGTCTATGTCCCCGGTTTGGATTTTATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCATGCCAGTCCCCATTCTTCCTCCAGATCCCATGCAAAGAAAAGGACAAGCACTAATGCAAATTGAAAATATTGCCAAGTTATGTAGCATTGTGGCAATTTTATCAACAGCAGCTTATCACTCAGCAGTCCGTGCAGGTTCATTGAAAAATTTAATCACATTGACTGGAAAAAATGGGAAATCCTCAGCTCGGTGGCCGAATCTTCCATGGTTGCAGACCGATACATGGGTCAAGAATTCCAGAAGTATGGTTTTGGAACATCTTGACGAGCAATGCGATCCCCAGCCAGGTGATATATGTTTCTTGCAATTTACCTCAGGTTCAACCAGTGAAGCTAAAGGAGTCATGATCACTCATGGTGGGCTAATTCACAATGTGAAGTTGATGGGAAGAAGATACAAGAGCACCTCAAGGACAATGCTTGTTAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGGGGACTATTTACATCTCTTGTTAGTGGTGGATCTGCAGTTCTATTTTCGCCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATTAGCAAGTACCAAGCAACTCATAGTGCTGGCCCCAATTTTTCCTTTGAGTTAGTGATTCGAAGATTGGAGTCTGACAAGGATAAGTCTCAGAGTTTAGACCTTTCATCCTTGACTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACCCTGAAAAGATTTATTGAGCTGACCAGTCCTTTTGGCTTATCTGAAAAGGTGATGGCTCCTGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGTAAGCCGATCATTGTTGATTGGCAGGGAAGAGTTTGTTGTGGATATGTTAATCACGAGGATGCGGATATTGACATTAGAATAGTTGATCCGGAGACTTGTGAAGAGCTTCAGGAAGATGGAAAGGAGGGAGAAATCTGGATTAGTAGTCCAAGTGCAGGCATAGGGTACTGGGGAAGGGAAGAATTGAGTCAAAAAACTTTCAGGAATGAACTTCATAATCGTCCTGGACGTAGCTACACAAGAACTGGAGACTTGGGAAGAATAATAGATCAGAAGCTATTCATAACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCAGATGTTGAGAAGACAGTTGAGACTTCATCTGAATTTCTTCGTCCTGGTTGCTGTGCTGTCATTGGAGTCCCCGAGGAAATTTTATCAGCGAAGGGGATCTCCATTCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAAGCCAGTCAGCAAAGATGTGATTCAGAAAATCAAGACTCGCGTGGTAGAAGAACATGGAGTCAATGTTGCTAGTGTCAAGTTGGTCAAGCCTAGAACCATCGGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTGTCAAACAGTTCACAGATGAAACACTGAACTTGGTACCACAAGGTCCAAAACCTATTTTGACAAAGAAATCTTTGTTAAGGTCATTCACTGCAGGAACATGGGGAGAAGAAAAAACACCAGGGCCCCAGCAAGTAAGAAGTATACTTTCACCTAGGAAAAGGATAAGTAAGAATGAAATTGTAGAGTTCTTGAAAGGGCTAATTTCTGAGCAGACTGGAATCCCGGTCAACAACATCTCAGTTACAGACAACCTGACATCCTATGGAATTGACTCAATTGGTGTGGTTAAAGCAACTCAAAGACTCTCAGATTTCTTAGGAACTCCAATTGCTGCTATAGATGTTTTCACTGCATCCTGCATTCTGGAATTGGCTAACTTCTGTGATGATCTTCTATCAAAGTCTCAACCTCAACTTTCAAGCAATACATCTAATGTTCCAGAAGCTGAGACTGATTCTACTGAATTGATTGTGGAGGTATCCAAATCTTGCCAATTTGGTATCCGTGTACTTCAACTCCTAGCACTTATTTATATTTCCTTCATGCTGGTTTCTCCTGCATATCTATCCATCACTACTTATCTAAATTTCATCCTAAGTGCCAGTAAATGGATAGATGGATTTCCCTggttaaattacttaatttccCTGACTTTTGCACCTCTTGCTTGGATTCTATGCATTGCTTCTACTTGCATTTGCATTTCATTGTTTGGAAGCTCTTTCTTGGGGCCAAACTATGCCCATACCTCTGAAATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGACACTATATAAGGCCCAAGAAATTTCTTCTAAAGTCCTAGCGATACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTCGAGATGCTGGGTTCAAGGATTGGATCCTCAGTTTTACTTGATACAGTTGACATCACTGACCCATCTTTGGTGTCAATTGGAGATGAAGTTGTCATTGCTGAAGGCGTTTTGGTTCAAAGCCACGAGGTAAAGAATGGAATTTTAAGTTTCCATCCTATTAGGATTGGCAAATGTTCTTCCATTGGACCTTATGCTGTTATCCAAAAAGGAAGTGTTATTGGAGAAGGTGCTGAGGTACAGGCCTTGCAAAAGGTTGGACAAGGCCAGCATGTGTTCAAACCGGCTAAgcttaataatgataataagAACGCAGAACTACCTGTTACCAGCAAAACTCAATTTGATATTATCTACCACTTTATGGGAATCTATCTCGTTGGCTTTCTCAGCTCCCTTGCTGCGGTTGTTGCCTACTTGTTATATATTAGATTCTCCAAGCAACCTCCATCACCCCAACACTTTTCCTTTGTTTGCATATGTGGGGCCTTCCATTGGATCCCGTTTACAATCATTGCATATGCTACCATGTTTTCTGAAGTCTCATCAAACCCCATCACCTTTGCCATGTCATTTACCGGTGCCTACTTGCTTCATGGTTTCATACTCATCATTCTCACCGCTGCTTTTAATCGTCTCCTCAAAACTAGTCAAAACCAAACCCAATTTAAAACCCGACTTCGATGTCAAGTGACAACTTCCTGCCACCTTAGATGTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATCTACGCCTTTTGGGTGCAAAAATTGGCAAGCATTGCTCCATTAGAGCCATCAACCCAGTTTCATATCCAGAGTTAATGTCAATTGGTGCCGGGGTCCATCTCGGAGATTTTAGCCGGATAATTACAGGTTTTCATTCTTCAAGTGGATATGTTACTGGAAAAATTGAGGTTCAGGACAACTCGGTTATCGGGAGTCAAAGTCTAATTCTCCCTGGCTCACTAGTCCAAAAGAATGTCATTCTTGGTGCACTTTCAGTTGCTCCAATGAATTCTACACTCCAAGAGGGTGGTGTCTACATTGGATCACAGTCCCAAGTTGTCATAAGGAACTCAGTGAAGAATGCTTATGATGAAGGGATAGAAGAAATGGACAtggtaagaaagaaaagagttgGTAATTTGGCTGCAGCATCGCACAAAAATGAGACACAGAAAGTGACATTGACCAGAACATGGTATCAGACCTTCTCAGCACTCTTCACTCAGCCACTGCTACAAACAGTGTTACCTCATATGGTGTTGGGTTTAGTAGTTTTTGCTCCATTGAACTGTGTTGTTTACCTAAAGAGTGCCAAGAAGCTTCCAATATATTGGTTGCTTCCCTTCTTTTGGGTTCACTCAGGAGCCTTAGCTGCATTGGCGTGTGTGATAGCCAAATGGATTCTTGTAGGAAGGAAGAAAGCAGGTGAAACAGTGCCTATATGGAGTCAAAGGATCACATTGGACAGCACATGGCAGGCCATTAGAACCTTAGTTGGAGATTATTTTACGGACATGACAAGTGGATCATTTTGGTTTGTGCTGTGGATGAAGTTGATGGGTGCAAATGTGGATATGGAACATGTAGTTTACGTGGATAGCATGGGAGCCTTGTTAAACCCGGAAATGGTTAAGATCGAGAGAGGGGGCTGTGTAGGAAGAGAAGCCTTGCTCTTTGGACATGTATATGAAGGAGAAGGAGGAATGGTAAAGTTTGGAGAGATCAAAATAGGAGAAGATGGGTTTGTAGGGAGTAGAGCCGTAGGCCATGCCAGCAGCAGTGTGACGAAGTGGCCCACCCAAAATGATTGGAGGTGGACCATCTTTACGCGGTTTTTCTTCGGCTTCCTACCAATAACGAAGGGCCACGTGTCTGGTCACCGACGCCGCCAACATACCTACGAGGATGTCTATCTGACACCTGCCAGACTGTCAATAGTCTTATTACCTCGGAATAGTGTCCATCTGCGTGACATTGTCACTGTCCCTCCCTTCATCCCAACTTTGCCCCCTCCTGTCTTTTTCTCTTCCACGCTTATCTTCCCTCTACTTCTTACCATACCAAGAGGTTCGTATTGTAAACTTCATTTCAAATCCCAGTGGCAATGCAAACACATTTTGCCATTTGTAACACTGTCTCACTCCCACCCATCATCAATCTGCTTAGAAgggttttcaaaaaagtttcCTCATTTCTGGCccgaaagaaaggaaaaaaggaagcttcaagagagagagtga 6396 0.4092 MAVGLSLSLDVDRFHRFPVSNSHKMDLERSIEDQFSKLHPSLPENTRIGIVGAGPSGLSAAYALARLGYKNITVLEKQHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLARETGSALEELDSHKLAVIDPSSGEYQDIKVADDYVSVMSLTLEIQEKVKNSGRIGVHAVSDIASDLTPEYLEHHGLKSVPKSVAYGYTASGYGFIQDMPYAYLHEFTRTSMAGKIRRFKDGYTCLWQKIAESLPLTLHCNTEVLAIRRNSDGVTVNVKSLNQVESLEFDKIIISGSFPLKYGRTYRSLPSTCIDCEAEVMDASDLEKDLFSKVEINDYYTTVLKIKGLEHLPVGFYYFGEYMEDPSTIGHPVAMQRFYGDTNIFLFWSYGNSVDIKGPTVTELAIKTIVAMGGEVESVILQRRFMYFPHVGSRDMKDGFYEKLESKLQGSRNTYYVGGLMAFELSERNSSYAMALICKNFANSNDFPIFPYTKNLFPLQAECQQKNPRELGELGEVQFPNLPTLNSYLKHWGTHPITQNKTLYTWINEDGTPVCQRTYGELYFNSSCIAHKLLTSQKPLIKPGDKVLLVYVPGLDFIDAFFGCLRAKVMPVPILPPDPMQRKGQALMQIENIAKLCSIVAILSTAAYHSAVRAGSLKNLITLTGKNGKSSARWPNLPWLQTDTWVKNSRSMVLEHLDEQCDPQPGDICFLQFTSGSTSEAKGVMITHGGLIHNVKLMGRRYKSTSRTMLVSWLPQYHDMGLIGGLFTSLVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFSFELVIRRLESDKDKSQSLDLSSLTFLMVAAEPVRQKTLKRFIELTSPFGLSEKVMAPGYGLAENCVFVSCAFGEGKPIIVDWQGRVCCGYVNHEDADIDIRIVDPETCEELQEDGKEGEIWISSPSAGIGYWGREELSQKTFRNELHNRPGRSYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSADVEKTVETSSEFLRPGCCAVIGVPEEILSAKGISIPDGSDQVGLVVIAEVRDGKPVSKDVIQKIKTRVVEEHGVNVASVKLVKPRTIGKTTSGKIKRFECVKQFTDETLNLVPQGPKPILTKKSLLRSFTAGTWGEEKTPGPQQVRSILSPRKRISKNEIVEFLKGLISEQTGIPVNNISVTDNLTSYGIDSIGVVKATQRLSDFLGTPIAAIDVFTASCILELANFCDDLLSKSQPQLSSNTSNVPEAETDSTELIVEVSKSCQFGIRVLQLLALIYISFMLVSPAYLSITTYLNFILSASKWIDGFPWLNYLISLTFAPLAWILCIASTCICISLFGSSFLGPNYAHTSEISIYSMDFVKWWTLYKAQEISSKVLAIHLRGTVFLKYWFEMLGSRIGSSVLLDTVDITDPSLVSIGDEVVIAEGVLVQSHEVKNGILSFHPIRIGKCSSIGPYAVIQKGSVIGEGAEVQALQKVGQGQHVFKPAKLNNDNKNAELPVTSKTQFDIIYHFMGIYLVGFLSSLAAVVAYLLYIRFSKQPPSPQHFSFVCICGAFHWIPFTIIAYATMFSEVSSNPITFAMSFTGAYLLHGFILIILTAAFNRLLKTSQNQTQFKTRLRCQVTTSCHLRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSYPELMSIGAGVHLGDFSRIITGFHSSSGYVTGKIEVQDNSVIGSQSLILPGSLVQKNVILGALSVAPMNSTLQEGGVYIGSQSQVVIRNSVKNAYDEGIEEMDMVRKKRVGNLAAASHKNETQKVTLTRTWYQTFSALFTQPLLQTVLPHMVLGLVVFAPLNCVVYLKSAKKLPIYWLLPFFWVHSGALAALACVIAKWILVGRKKAGETVPIWSQRITLDSTWQAIRTLVGDYFTDMTSGSFWFVLWMKLMGANVDMEHVVYVDSMGALLNPEMVKIERGGCVGREALLFGHVYEGEGGMVKFGEIKIGEDGFVGSRAVGHASSSVTKWPTQNDWRWTIFTRFFFGFLPITKGHVSGHRRRQHTYEDVYLTPARLSIVLLPRNSVHLRDIVTVPPFIPTLPPPVFFSSTLIFPLLLTIPRGSYCKLHFKSQWQCKHILPFVTLSHSHPSSICLEGFSKKFPHFWPERKEKRKLQERE 2131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2715 2131 SUPERFAMILY ACP-like 1146 1230 IPR036736 -
Ssu3g2715 2131 Pfam Flavin containing amine oxidoreductase 56 290 IPR002937 GO:0016491
Ssu3g2715 2131 SUPERFAMILY FAD/NAD(P)-binding domain 44 295 IPR036188 -
Ssu3g2715 2131 PANTHER AMP-BINDING ENZYME 25 1768 - -
Ssu3g2715 2131 PANTHER AMP-BINDING ENZYME 1767 1980 - -
Ssu3g2715 2131 SMART Phosphopantetheine attachment site 1151 1222 IPR020806 GO:0031177
Ssu3g2715 2131 Pfam Phosphopantetheine attachment site 1153 1217 IPR009081 -
Ssu3g2715 2131 ProSitePatterns Putative AMP-binding domain signature. 704 715 IPR020845 -
Ssu3g2715 2131 Gene3D Hexapeptide repeat proteins 1608 1763 - -
Ssu3g2715 2131 Gene3D Hexapeptide repeat proteins 1367 1474 - -
Ssu3g2715 2131 Gene3D - 118 226 - -
Ssu3g2715 2131 CDD FAAL 523 1096 IPR040097 GO:0008610
Ssu3g2715 2131 PANTHER AMINE OXIDASE 25 1768 - -
Ssu3g2715 2131 PANTHER AMINE OXIDASE 1767 1980 - -
Ssu3g2715 2131 Gene3D - 327 420 - -
Ssu3g2715 2131 Pfam AMP-binding enzyme 548 982 IPR000873 -
Ssu3g2715 2131 Gene3D - 47 470 IPR036188 -
Ssu3g2715 2131 ProSiteProfiles Carrier protein (CP) domain profile. 1148 1222 IPR009081 -
Ssu3g2715 2131 Gene3D - 1138 1220 IPR036736 -
Ssu3g2715 2131 SUPERFAMILY Trimeric LpxA-like enzymes 1635 1738 IPR011004 -
Ssu3g2715 2131 ProSitePatterns Phosphopantetheine attachment site. 1177 1192 IPR006162 -
Ssu3g2715 2131 Gene3D - 503 976 IPR042099 -
Ssu3g2715 2131 Gene3D - 977 1104 IPR045851 -
Ssu3g2715 2131 SUPERFAMILY Trimeric LpxA-like enzymes 1372 1471 IPR011004 -
Ssu3g2715 2131 SUPERFAMILY Acetyl-CoA synthetase-like 517 1100 - -
Ssu3g2715 2131 PRINTS Adrenodoxin reductase family signature 47 69 - -
Ssu3g2715 2131 PRINTS Adrenodoxin reductase family signature 71 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2715 Ssu-Chr3 81168225 81184840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2715 673 1015 Monolignol Biosynthesis Gene Families AT1G20480 25.291 6.34e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2715 - - adu:107477067 2933.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2715 3 81168225 81184840 Ssu3g2715 3 81168225 81184840 ECH
Ssu8g0391 8 6292019 6299815 Ssu3g2715 3 81168225 81184840 PCT