Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2703 ATGGATTCAGCAACACCCCCGTCGCAGGAGCTGGATCTCGACAACCTCAAACCCCTCAAAGTCCTCGGAAAGGGCGCGATGGGGACTGTCTTCCTCGTCCGCGACAACTCCGACACCACGCAACCCCCGTTCGCCCTCAAAGTCGTGGACAAAACGTGCGTCCACGCGAAGCTGGACGCGGAGCGCCGCGCCCGTTGGGAAATCCAAGTCCTCTCGACGCTCTCCCACCCTTTCCTCCCTTCCCTAATCGCCGCGTTCGAGTCCCCACAGTTCTTAGCGTGGGCCCTCCCGTACTGCCCCGGCGGCGACCTCAACGTCCTCCGCTACCGCCAAACGGAACGCGTCTTCTCCCCCGCCGTCATCCGCTTCTACGTGGCGGAAATCCTCTGCGCGCTCGACCACCTCCATTCCATGGGCATCGCGTACCGCGACCTGAAACCCGAAAACGTCCTCATCCAGAACACCGGCCACGTCACCCTCACCGATTTCGACCTCTCCCGCAAACTCTCccccaaacccaaacccaaaccccTCGTGTCTTCCATCCCCTTGCCCGCTCCCGAACCTCGCCGGAAACACCGCCGGAATTTCTCCCGGTGGATCCCCCTCCTCCCGCCGGAAACCTCCGCTAAAAACAAAAACGCCGGCGGCCTCAAGAAGGCGAAGTCCGCCCGAGTCAGCCCGGTGAGTCGGCGAAAACCGAGTTTCTCCAACGGCGAACGGTCAAATTCCTTCGTCGGCACAGAGGAGTACGTCTCGCCGGAGGTCGTCCGCGGCGACGGACACGAGTTCGCCGTGGACTGGTGGGCCCTCGGGATACTCATCTACGAAATGCTCTACGGCGCGACGCCGTTTAAGGGGAAGAACCGCAAGGAAACGTTCCGGAACGTTCTCACGAAGGCGCCGGAGTTTGTGGGGAAGAGAACGGCGTTGACGGACCTTGTTGAGAGGCTGTTGGAGAAGGATCCGACTAAGCGGTTGGGCTACACGCGCGGCGCGGCGGAGATCAGGGAGCACGAGTTCTTCCGAGGGGTCAGGTGGGAGCTGTTGACGGAGGTGGTGCGGCCGCCGTTCATTCCGGCCAGGGAGGACGGCGCCGGAGAGGCGCCCGAGAAGTTCGGAAACGGCTGCGTGGATATTAGGGATTACTTCCAGAACTTGAAATCGTCGCCGTCGGTGCCGGCTTCGCCGTCGCCGTCGTCGCTGTCTTGCAGGTTTAAGAAGAATGTTTCTCTATCAGAATTCTGA 1248 0.6058 MDSATPPSQELDLDNLKPLKVLGKGAMGTVFLVRDNSDTTQPPFALKVVDKTCVHAKLDAERRARWEIQVLSTLSHPFLPSLIAAFESPQFLAWALPYCPGGDLNVLRYRQTERVFSPAVIRFYVAEILCALDHLHSMGIAYRDLKPENVLIQNTGHVTLTDFDLSRKLSPKPKPKPLVSSIPLPAPEPRRKHRRNFSRWIPLLPPETSAKNKNAGGLKKAKSARVSPVSRRKPSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILIYEMLYGATPFKGKNRKETFRNVLTKAPEFVGKRTALTDLVERLLEKDPTKRLGYTRGAAEIREHEFFRGVRWELLTEVVRPPFIPAREDGAGEAPEKFGNGCVDIRDYFQNLKSSPSVPASPSPSSLSCRFKKNVSLSEF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2703 415 SUPERFAMILY Protein kinase-like (PK-like) 13 370 IPR011009 -
Ssu3g2703 415 Gene3D Phosphorylase Kinase; domain 1 16 102 - -
Ssu3g2703 415 ProSiteProfiles Protein kinase domain profile. 16 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2703 415 ProSitePatterns Protein kinases ATP-binding region signature. 22 47 IPR017441 GO:0005524
Ssu3g2703 415 Gene3D Transferase(Phosphotransferase) domain 1 239 361 - -
Ssu3g2703 415 MobiDBLite consensus disorder prediction 166 191 - -
Ssu3g2703 415 Gene3D Transferase(Phosphotransferase) domain 1 103 188 - -
Ssu3g2703 415 MobiDBLite consensus disorder prediction 207 243 - -
Ssu3g2703 415 PANTHER FLIPPASE KINASE 1-RELATED 11 392 - -
Ssu3g2703 415 Pfam Protein kinase domain 237 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2703 415 Pfam Protein kinase domain 19 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2703 415 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 11 392 - -
Ssu3g2703 415 SMART serkin_6 16 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2703 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2703 Ssu-Chr3 80915821 80917068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2703 11 399 AGC Kinase Gene Family AT3G20830 61.558 2.56e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ssu3g2703 Pkinase 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2703 - K08286 gmx:100785281 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2703 3 80915821 80917068 Ssu3g2703 3 80915821 80917068 ECH
Ssu8g0405 8 6512414 6513553 Ssu3g2703 3 80915821 80917068 PCT