Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2683 ATGGCCTCCGTAGCACTCACCACCACCCTCCCCTCCCTCCGCCTCGGCCACAACACCACCGTCAAACCCAACCGCTTCACTTTCATTTCACCCTCCCCACTCAAACCGAACATCCACGCTTCCATTTCCTCCCTCCCAAATTTCTCACTAAAAAAACCAACCGTCGTTTTCAATCGAAAACACAAACACCCCGCCCTCACCGTCAGAGCCTCCGCCGCATCAGCCTCCGTTACACCATCTCCGGCACCGGCGCAGCCATGGCAAGGCGCGGCCATAAAACCCCTACTAGCCTCCATCGCGACGGGGGTCCTCCTCTGGTTCTCTCCCGTCCCCGCGGGCGTGAGCCGCAACGCGTGGCAATTACTCGCGATTTTCCTAGGTACAATCGTCGGGATTATAACCCAACCGTTACCCCTCGGCGCGGTAGCGATACTAGGGTTGGGCGTTTCCGTTCTCACCAAAACCCTAACGTTCGCCGCCGCGTTCTCGGGCTTCGGCGACCCGATCCCGTGGCTCATCGCCCTGGCGTTCTTCTTCGCCAAGGGGTTCATCAAAACCGGCCTCGGAAACCGCGTCGCGTACCAGTTCGTGAAGCTGTTCGGCAGCTCCTCGCTAGGGTTGGGGTACAGCCTGGTCTTCAGCGAGGCCTTGTTGGCGCCGGCAATTCCGTCGGTGTCGGCCCGGGCGGGGGGGATTTTTCTGCCGCTGGTGAAGGCGCTGTGCGTGGCGTGCGGCAGCAACGCCGGCGACGGGACGGAGAACAGGTTGGGGGCGTGGCTGATGCTGACGTGCTTCCAGACTTCGGTGATTACGTCGGCGATGTTCTTGACGGCGATGGCGGCGAATCCGCTGTGTGCGACGCTTACTCAGAACTCGATTAACCAGACGATTGGGTGGTTGGACTGGGCCAAAGCTGCTATTGTTCCTGGCATTGCGTCGTTGGTACTGGTGCCGTTGATTTTGTATGTTATATATCCTCCCACCCTGAAGAATAGTCCCGATGCTCCTAAGCTTGCCAGGGAGAAGTTGGAGAAGATGGGGCCCATGACGGCCCATGAGAAGATCATGACCGCCACTCTGCTTCTCACGGTGGGACTTTGGGTATTTGGAGGGCTTCTTAATATTGATGCTGTATCTGCTGCAATTCTTGGATTAGCTGTACTTCTTGTCACAGGGGTTGTAACATGGAAGGAGTGCTTAGCTGAAGGAGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTTATAGCAATGGCTGGGTATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTCGGTGGATTGGGTCTATCATGGCAACTATCTTTTGGGATTCTAGTCCTTCTCTACTTTTACTCTCATTACTTCTTTGCAAGTGGAGCCGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCCACTGCTCTGGGGACTCCGCCATACTTTGGAGCCATAGTGCTGTCCTTCCTCTCCAACCTTATGGGTGGCCTTACTCATTATGGGATTGGATCAGCTCCTGTGTTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGCTATGGATTCCTCATTAGTATTGTTAACATTATAATCTGGCTCGGACTAGGAGGAGTTTGGTGGAAATTCATTGGCTTGTGGTAA 1674 0.543 MASVALTTTLPSLRLGHNTTVKPNRFTFISPSPLKPNIHASISSLPNFSLKKPTVVFNRKHKHPALTVRASAASASVTPSPAPAQPWQGAAIKPLLASIATGVLLWFSPVPAGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNAGDGTENRLGAWLMLTCFQTSVITSAMFLTAMAANPLCATLTQNSINQTIGWLDWAKAAIVPGIASLVLVPLILYVIYPPTLKNSPDAPKLAREKLEKMGPMTAHEKIMTATLLLTVGLWVFGGLLNIDAVSAAILGLAVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKFIGLW 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2683 557 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 109 551 IPR001898 GO:0016020|GO:0022857|GO:0055085
Ssu3g2683 557 CDD ArsB_NhaD_permease 129 551 - -
Ssu3g2683 557 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 39 557 - -
Ssu3g2683 557 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 39 557 IPR030676 -
Ssu3g2683 557 Pfam Sodium:sulfate symporter transmembrane region 94 557 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2683 Ssu-Chr3 80568503 80571589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2683 21 556 Antiporters AT5G12860 79.482 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2683 - - vun:114169835 988.408