Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2669 ATGCAGGAAATTGAGATACCAATTGTCTCTGAAACACTTGATGTCCCTCCCATGAAGGAGGAGTCATCTTGCAGCTCTGTTTGTCCTTTTTCCGGACATGAAAACAGTGTTGTGGCATCAAAAGAGTCGTCAAAGTCAGCAAAGAAACTCTCTGGACTCATTGTTTTCTATGCTATTGTCATGGTTGTGGAAATTATTGGTGGAATAAAAGCTCACAGCCTAGCTGTCATCAGTGATGCAGCACACTTGCTTTCTGATATTGCTGgattctctatctctctctttgcAGTGTGGGCCTCAGGTTGGGAGGCAACACCGCATCAATCTTTCGGATACAATCGTCTTGAGGTTTTGGGGGCTCTTGTATCTGTGCAGTTAATTTGGTTGATATctggttttttaatatatgaagcTGTTGGTAGACTTGTTCTCCGAAATGCCAGTGTGAATGGAAAGCTCATGCTTGCAATTGCAGCACTTGGGTTTGTTCTTAACTTTATCATGGTTGCATGGATTGGGCATGATCatagtcatcatcatcatcatcatcatggtTGTCAAAACTCAGGTAATGATCATAGTCATCATCAATGCCAGACAGGTCATGATCATGAGAAGGAGAAACTATCTAAAATAACTGATGAGGAGAATGTTACCCTGATTTCAAGTAGTCAGAGAAATACTAATGTCTTGAACATAAATCTCCAGGGGGCGTATTTGCATGTCATGGCTGATATGATTCAATCTATTGGAGTGATGATTGCTGGAGCCGTAATATGGGCTGAACCGGAGTGGTTTATAGTTGACCTTGTGTGCACTCttatattttctgttttatCTTTAGGTACTACTCTGCCCATGCTTAGGAATATTTATGGCATTCTGATGGAAAGGACACCAAGTGAAATCGATATCAATAAGCTGGAAAATGGCCTCAGAAATATCAAGGGAGTGCAGGATGTTCATGACTTGCACGTTTGGGCTATAACCGTTGgaaaatttgttttatcttgTCACGTTGTGGCTGAGCCTGGCATAAGTTCCATTGATTTACTAGGCACGATTAAACATAACTGTgaaaaaacatatcaaatacaACATGTAACCATCCAAATTGAGTAA 1122 0.3725 MQEIEIPIVSETLDVPPMKEESSCSSVCPFSGHENSVVASKESSKSAKKLSGLIVFYAIVMVVEIIGGIKAHSLAVISDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVLGALVSVQLIWLISGFLIYEAVGRLVLRNASVNGKLMLAIAALGFVLNFIMVAWIGHDHSHHHHHHHGCQNSGNDHSHHQCQTGHDHEKEKLSKITDEENVTLISSSQRNTNVLNINLQGAYLHVMADMIQSIGVMIAGAVIWAEPEWFIVDLVCTLIFSVLSLGTTLPMLRNIYGILMERTPSEIDINKLENGLRNIKGVQDVHDLHVWAITVGKFVLSCHVVAEPGISSIDLLGTIKHNCEKTYQIQHVTIQIE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2669 373 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 2 373 - -
Ssu3g2669 373 MobiDBLite consensus disorder prediction 196 210 - -
Ssu3g2669 373 Pfam Cation efflux family 54 296 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Ssu3g2669 373 PANTHER METAL TOLERANCE PROTEIN B 2 373 - -
Ssu3g2669 373 SUPERFAMILY Cation efflux protein transmembrane domain-like 48 297 IPR027469 -
Ssu3g2669 373 Gene3D Cation efflux protein transmembrane domain 47 295 IPR027469 -
Ssu3g2669 373 TIGRFAM CDF: cation diffusion facilitator family transporter 50 373 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Ssu3g2669 373 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 300 373 IPR036837 -
Ssu3g2669 373 MobiDBLite consensus disorder prediction 182 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2669 Ssu-Chr3 80468886 80470007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2669 7 373 Inorganic Solute Cotransporters AT2G29410 50.404 1.22e-119 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2669 K14689 - gmx:100777590 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2669 3 80468886 80470007 Ssu3g2669 3 80468886 80470007 ECH